| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1808 |
|---|
| Symbol | |
|---|
| ID | 3844733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2183691 |
|---|
| End bp | 2185481 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637839109 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_440002 |
|---|
| Protein GI | 161723118 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.67175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCC TTTCCGACGA AGCGCCGCTC GCGCTGTTCG AATCGGTTCA TACCGAAACC
GCAGTCGCGG CCGGCGACGT CACGCTCGCC GCGAAGACCT GGGGCGACGC GTCGCGTCCC
GCCGTCGTGC TCGTTCACGG CTATCCGGAC AGCAGCGAAG TCTGGCGCCG CGTCGCGCCC
CTCCTCGCGA AGTCGTACTA CGTGATCGCG TACGACGTGC GCGGCGCGGG CCTGTCGACG
AAGCCCGCGC GCACGGCCGA TTACCGGCTC GAGCGGCTCG TCGACGACTT CGTCGCGGTG
ATCGACGCGC TCGCGCCGAA CCGCGCGGTA CACGTGATCG GCCACGACTG GGGCTCGATC
CAGGGCTGGG AGTTCGTCAC CGAGCCGCGG CTCGCGGGGC GCATCCTGTC GTACACGTCG
TGCTCCGGGC CGAATCTCGA CCACGTCGGC TACTGGCTGC GCCAGCAGCT CGCGCGGCCG
TCGCCCGCGT CGATCAGGCG GCTCGCCGGC CAGCTCGTGC GCTCGTGGTA CGTGTACCTG
TTTCACCTGC CGTTCATTCC CGAGCTCAAC TGGCGCCTGT GGCTCGGCCG CGCGTGGCCC
GCGCTGATGC GCCGCATCGA GCGCACCGAC GTCGGCCCGC GCCCGACGCA GACCGAGGAC
GGCGTGCACG GCGTGCGCCT GTATCGCGCG AACTTCATCC GCCGCGTGTT CGCGCCGCGC
GAACGCTACG CGCACGCGCC CGTGCAGGTC GTCGTGCCGC TGCGCGACAA GTTCGTGAGC
CCCGCGCTGT CGGCCGACAT CGCGCGCTGG GTGCCGACCT ATTACCGCCG CGAGGTGGCC
GAGCGGCACT GGCTGCCGAT GTCGGACCCC GCACGCTTCG CGGCGCTCGC GCAGGAGTTG
ATCGAAGCGG TCGAGACGGG CGTTCAGCCG CCCGCGCTCG CGCATGCGCG CCGCTTGAGC
GGCACCGGTC CGTTCGTCGG CAAGCGCGTC GTGATCACCG GCGCGGGCAG CGGGATCGGC
CGCTGCGCGG CCGTCGAATT CGCGAAGCAA GGCGCGTCGA TCGTCGCCGT CGACATCGAC
GAGCAGGCGG CCGAGCGCAC CGCGCTCCTC GTGCGGCTGC TCGGCGCGCA GGCCGACGTG
CGGCGCGTCG ACGTCGGTTC GGCCGACGAC ATGGAAGCGC TCGCGAACTG GGTCGGCGAG
GAGCTGGGCG GCGCGGACGT CGTCGTCAAC AACGCCGGCA TCGGCATGGC GGGCGGCATC
CTCGACACGT CGGCCGCGCA TTGGGAGCGC ATCCTGCGCG TGAACCTGTG GGGCGTGATC
CACGGCTCGC GCCTGTTCGC CAAGCAGATG GCCGCGCGCG GCGCGGGCGG CCACATCGTC
AACACCGCGT CGGCGGCCGC GTTCGGCCCG TCGCGCGACC TGCCCGCGTA CGCGACGACG
AAGGCCGCGG TGCTGATGCT GAGCGAGTGC ATGCGCGCGG AGCTCGCGGA CCACGGGATC
GGCGTGACGG CCGTCTGCCC CGGTTTCGCC GAGACGGGCA TCATGGCGTC GACCCAATAC
GCGGCAGCAA AGAGCGCGCA GGACGAAGCG CGGCTGCGCA AGCGCGCGAC GAAGCTCTAC
CAGATGCGCG GCCTGAAGCC GGAGAGCGTC GCGAAGGCGA TGGTCGACGG CGTGCTGCAG
AACAAGCCGG TTGTCGCGAT CGGCGCGGAA GCGCACGCGA TGCGCTTCGT CGGGCGCTTC
GCGCCGTGGC TCGGCCGGAT GATCGCCCGC GTCAGCATGG CGTCGCACTG A
|
|---|
| Protein sequence | MQPLSDEAPL ALFESVHTET AVAAGDVTLA AKTWGDASRP AVVLVHGYPD SSEVWRRVAP
LLAKSYYVIA YDVRGAGLST KPARTADYRL ERLVDDFVAV IDALAPNRAV HVIGHDWGSI
QGWEFVTEPR LAGRILSYTS CSGPNLDHVG YWLRQQLARP SPASIRRLAG QLVRSWYVYL
FHLPFIPELN WRLWLGRAWP ALMRRIERTD VGPRPTQTED GVHGVRLYRA NFIRRVFAPR
ERYAHAPVQV VVPLRDKFVS PALSADIARW VPTYYRREVA ERHWLPMSDP ARFAALAQEL
IEAVETGVQP PALAHARRLS GTGPFVGKRV VITGAGSGIG RCAAVEFAKQ GASIVAVDID
EQAAERTALL VRLLGAQADV RRVDVGSADD MEALANWVGE ELGGADVVVN NAGIGMAGGI
LDTSAAHWER ILRVNLWGVI HGSRLFAKQM AARGAGGHIV NTASAAAFGP SRDLPAYATT
KAAVLMLSEC MRAELADHGI GVTAVCPGFA ETGIMASTQY AAAKSAQDEA RLRKRATKLY
QMRGLKPESV AKAMVDGVLQ NKPVVAIGAE AHAMRFVGRF APWLGRMIAR VSMASH
|
|---|
| |