| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1805 |
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| Symbol | |
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| ID | 3845662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 2179827 |
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| End bp | 2181500 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637839106 |
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| Product | nodulation competitiveness protein nfeD |
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| Protein accession | YP_439999 |
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| Protein GI | 83716454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.151355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCGGG ATGAGCCCCG CCGACTACCG CGACGCCGCG CTCGCCGCGC GCGCGGCCGC
TTCGCGCTTT CGCCGGAAAC CGCCTACTCT TTAAGCACCG GGCGCACGCC CTTCTCACGG
CCCGGCTGCG GCGCCGCACC ATGCGGCCGC GCGCCGCCGG CCGACACCGC GATGCAAACG
CCCCATCCCT CGCCACGCCC GCCGCCGCGG CACGGCAGGC TTGCCGCTCG GCTCGCGCGC
GCGGCCGTGC TGATCGGCCT GCTGCTTGCA TGCGCGGCCG CCGCAGCGGC AACGCGCGCG
CCCGTCGTCG TGATTCCGGT CACGGGCGCG ATCGGCCCGG CGAGCGCCGA TTTCATCGTC
CGCGGCCTCG AGCGCGCCGC ACGCGAGCGC GCGCAGCTCG CGATCGTCCA GCTCGACACG
CCGGGCGGCC TCGATACGTC GATGCGGCAG ATCATCAAGG CGATCGTCGG CTCGGGCGTG
CCCGTCGCCG CGTTCGTCGC GCCGGGCGGC GCGCGCGCGG CGAGCGCCGG CACCTACATC
GTCTACGCGA GCCATATCGC GGCGATGGCG CCCGGCACGA ACCTCGGCGC GGCCTCGCCC
GTGCAGCTCG GCATCGGCGG GCGGGCGCCG CCCGCCGCGC GGCGCGAACC CGGCGCCGCA
TCCGGCGCAT CCGGCGCAGG CGCGGCCGAC GCCGAATCGA CCGAAACCCG CAAGGCGATG
CAAGACGCGG CCGCGTACAT CCGCGGCCTC GCGCAGTTGC GCGGGCGCAA CGCCGACTGG
GCGGAGCGCG CGGTGCGCGA GGCGGTGAGC CTGCCCGCGA GCGACGCGCT CGCGCAGCAC
GTCGTCGACC TGATCGCGAA CGATCCGGCC GATCTCGCCG CGAAGCTCGA CGGCCGCAAG
GTCGTCACCG CAACGGGCGC GCACTGGCTC GACACCGCGC ACGCGCCGAT CGAGACGATC
GAGCCCGACT GGCGCAGCCG GCTGCTCGCG ACCGTCGCCG ATCCGAGCGT CGCGCTCGTG
CTCGTCACGC TCGGCATGTA CGGGCTCTTC TTCGAATTCG CGAATCCCGG CTTCGTGCTG
CCTGGCGTCG CGGGCGCGAT CAGCCTGCTC GTCGGCCTGT TCGCGCTGCA GATGCTGCCG
ATCAGCTACG CGGGCCTCGC GCTCGTGCTG CTCGGCATCG CGTTCCTGAT CGCCGAAGCG
TTCCTGCCGA CGTTCGGCAC GCTCGGCGTG GGCGGCATCG TCGCGTTCGC GATCGGCGCG
CTGATGCTGA TCGACACCGA CGTGCCCGGC TACGGCGTGC CGTGGCCCGT GATCGCGTCG
CTCGCGGCCG CGGGCACGAT CCTCGTGTTC GGCGTGTCGG GCTTCGCGCT GCGCGCGCGG
CGGCGGCCCG TCGTCACCGG CGCGGAGGCG ATCGTCGGCA GCATCGGCGA AGTGCTCGAC
GACGGTCTCG TTCCCGATCA GCCGCCGCAG GTCGGCCCGA GCGCGGACCC GGCCGCGCCG
CTCGCGCCGT CCGCGGCCGG CTGGGCGCGC GTGCACGGCG AGCGCTGGCG CGTCGCGAGC
GCGACGCCGA TCGCGGCCGG CCGCCGCGTG CGCGTGACGG GCAGAAGCGG CCTCACGCTG
ACCGTCGCCC CGCTGTACGA CCACACCGCC CCGACACAAG GAGAACCATC ATGA
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| Protein sequence | MARDEPRRLP RRRARRARGR FALSPETAYS LSTGRTPFSR PGCGAAPCGR APPADTAMQT
PHPSPRPPPR HGRLAARLAR AAVLIGLLLA CAAAAAATRA PVVVIPVTGA IGPASADFIV
RGLERAARER AQLAIVQLDT PGGLDTSMRQ IIKAIVGSGV PVAAFVAPGG ARAASAGTYI
VYASHIAAMA PGTNLGAASP VQLGIGGRAP PAARREPGAA SGASGAGAAD AESTETRKAM
QDAAAYIRGL AQLRGRNADW AERAVREAVS LPASDALAQH VVDLIANDPA DLAAKLDGRK
VVTATGAHWL DTAHAPIETI EPDWRSRLLA TVADPSVALV LVTLGMYGLF FEFANPGFVL
PGVAGAISLL VGLFALQMLP ISYAGLALVL LGIAFLIAEA FLPTFGTLGV GGIVAFAIGA
LMLIDTDVPG YGVPWPVIAS LAAAGTILVF GVSGFALRAR RRPVVTGAEA IVGSIGEVLD
DGLVPDQPPQ VGPSADPAAP LAPSAAGWAR VHGERWRVAS ATPIAAGRRV RVTGRSGLTL
TVAPLYDHTA PTQGEPS
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