Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1792 |
Symbol | macB |
ID | 3846245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 2164835 |
End bp | 2166796 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637839093 |
Product | macrolide-specific ABC-type efflux carrier |
Protein accession | YP_439986 |
Protein GI | 83717068 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.855927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAC CGCTGCTTCA ACTCACGCGC GTCACGCGCC GCTTTCCCGC GGGCGACAAG GACGTCGTCG TGCTCGACGA CGTGAGCCTG TCGATCGACG CGGGCGAGAT CGTCGCCATC GTCGGCGCGT CCGGCTCGGG CAAATCGACA CTGATGAACA TCCTCGGCTG CCTCGACCAT CCGAGCTCGG GCAGCTACCG GGTCGGCGCA CGCGAGACGA GCGAGCTCGA AAGCGACGAG CTCGCGCGCC TGCGCCGCGA GCACTTCGGC TTCATCTTCC AGCGCTATCA CCTGCTGCCG CATCTGTCCG CGGCCGAAAA CGTCGAAATG CCCGCCGTCT ACGCGGGCAG CGCGCAGGCG CAGCGCCGCG AGCGCGCGCT GATGCTGCTC GCGCGCCTGG GCCTGTCCGA TCGCGCCGGC CACCGGCCGA GCCAGTTGTC GGGCGGCCAG CAGCAGCGCG TGAGCATCGC GCGCGCGCTG ATGAACGGCG GCGAGGTGAT CCTCGCCGAC GAGCCGACGG GCGCGCTCGA TTCGAAGAGC GGCCACGACG TGATCCGGGT CCTGCGCGAG CTGAACGCGC TCGGCCACAC CGTCATCATC GTCACGCACG ACGAAAACGT CGCCGCGCAC GCGCGCCGCA TCATCGAGAT CAGCGACGGG CGCATCGTCG GCGACCGCCT CAATCCGCAC GCGGACGGCG CCGACGCCGC GTCCGGCGCG AGCGGCGATG CGGGGCCGCA GCGCGCGCGC CGACTGTCGG CAGGCGTCGG CCGCTTCGCG GAAGCGTTCC GGATGGCATG GATCGCGCTC GTATCGCATC GGCTGCGCAC ACTGCTCACG ATGCTCGGAA TCATCATCGG GATCACGTCG GTCGTGTCGA TCGTCGCGAT CGGCGAAGGC GCGAAGCGCT ACATGCTCGA CGAGATCGGC AGCATCGGCA CAAACACGAT CAACGTCTAC CCGGGCGCCG ACTGGGGCGA CAGCCGCGCG GACGCGATCC AGACGCTCGT GCCCGCCGAC GCCGCCGCGC TCGCCGATCA GATCTACGTC GACAGCGCGA CGCCCGAGAC GTCGCGCAGC CTGCTGCTGC GCTATCGGAA CATCGACGTC AACGCGCTCG TGAGCGGCGT CGGCGAGCGC TTCTTCCAGG TTCGCGGGAT GAAGATGGCG CAAGGCATCG CATTCGGCCC CGACGAGGTG CGCCGCCAGG CGCAAGTCGC GGTGATCGAC GAGAACACGC GCCGCAAGCT GTTCGGCGCG AACCCGAATC CGCTCGGCGA AGTGATCCTG ATCGACAATC TGCCGTGCAT CGTGATCGGC GTGACCGCGG CAAAGAAAAG CGCGTTCGGG GACACGAAGA ATCTGAACGT CTGGGTGCCC TACACGACGG CGTCCGGACG CCTGTTCGGC CAGCGGCATC TCGACAGCAT CACCGTGCGC GTGCGCGACG GCCAGCCGAG CGCCGCGGCC GAGCAAAGCC TGACGAAGCT GATGCTGCAG CGGCACGGCC GCAAAGATTT CTTCACGTAC AACATGGACA GCGTCGTCAA GACGGTCGAG AAGACCGGGC AGTCGCTCAC GCTGCTGCTG TCGCTGATCG CGGTGATCTC GCTCGTCGTG GGCGGAATCG GCGTGATGAA CATCATGCTC GTGTCGGTGA CCGAGCGCAC GCGCGAGATC GGCATCCGGA TGGCGGTCGG CGCGCGGCAG GCCGACATCA TGCAGCAGTT CCTCGTCGAA GCCGTGACCG TCTGCCTGAT GGGCGGCGCG ATCGGCATCG TGCTGTCGTT GGGCATGAGT TTCGTGTTCT CGCTATTCGT CGACCAATGG AAAATGGTGT TCTCGGCCGG CTCGATCGTG TCGGCGTTCC TGTGCTCGAC GCTGATCGGC GTCGTGTTCG GCTTCATGCC CGCGCGCAAC GCGTCGCGGC TCGATCCGAT CGATGCGCTC GCGCGCGATT GA
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Protein sequence | MAEPLLQLTR VTRRFPAGDK DVVVLDDVSL SIDAGEIVAI VGASGSGKST LMNILGCLDH PSSGSYRVGA RETSELESDE LARLRREHFG FIFQRYHLLP HLSAAENVEM PAVYAGSAQA QRRERALMLL ARLGLSDRAG HRPSQLSGGQ QQRVSIARAL MNGGEVILAD EPTGALDSKS GHDVIRVLRE LNALGHTVII VTHDENVAAH ARRIIEISDG RIVGDRLNPH ADGADAASGA SGDAGPQRAR RLSAGVGRFA EAFRMAWIAL VSHRLRTLLT MLGIIIGITS VVSIVAIGEG AKRYMLDEIG SIGTNTINVY PGADWGDSRA DAIQTLVPAD AAALADQIYV DSATPETSRS LLLRYRNIDV NALVSGVGER FFQVRGMKMA QGIAFGPDEV RRQAQVAVID ENTRRKLFGA NPNPLGEVIL IDNLPCIVIG VTAAKKSAFG DTKNLNVWVP YTTASGRLFG QRHLDSITVR VRDGQPSAAA EQSLTKLMLQ RHGRKDFFTY NMDSVVKTVE KTGQSLTLLL SLIAVISLVV GGIGVMNIML VSVTERTREI GIRMAVGARQ ADIMQQFLVE AVTVCLMGGA IGIVLSLGMS FVFSLFVDQW KMVFSAGSIV SAFLCSTLIG VVFGFMPARN ASRLDPIDAL ARD
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