Gene BTH_II1736 details

Gene Information

• Locus tag: BTH_II1736
• Symbol: hpaR
• ID: 3845439
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 2098952
• End bp: 2099389
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637839037
• Product: homoprotocatechuate degradation operon regulator, HpaR
• Protein accession: YP_439930
• Protein GI: 83716641
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators
• TIGRFAM ID: [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0455429
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGTA CGTTCGATCA CCGCAATCTG GCCATGCTGC TGCTCGAGGC CCGCGAAACG 
TTGATGGGCC GGTTCCGGCC GATCCTGAAG GAATTTTCGC TGACGGAACA GCAATGGCGG 
ATCATTCGCG TACTGGACGG CGAACCGTCT CATGAGCTCG AAGCCGGACA GATCGCGAAG 
CGTTGCAGCA TCCTGAGCCC GAGCCTCACG GGCGTGCTGG AGAGAATGGA GCGCGACGGC 
CTGATCCGCC GCACGCGCGC GCAGGAGGAT CAACGCAGGC TGATCGTCAG CCTGACGCCG 
CAGAGCCGTC AACTCGTCGC GCAAATCAGT CCGCGCATTG ACGAGCAGTA TCGGCTCATC 
GAGCAGCGCT TCGGCGCGGA TGCGCTCGGT GAGGTGTACG CGGCGCTCGA CAAGCTGATC 
GAAGTCGGCG GCTCGTGA 

 

Protein sequence

MNRTFDHRNL AMLLLEARET LMGRFRPILK EFSLTEQQWR IIRVLDGEPS HELEAGQIAK 
RCSILSPSLT GVLERMERDG LIRRTRAQED QRRLIVSLTP QSRQLVAQIS PRIDEQYRLI 
EQRFGADALG EVYAALDKLI EVGGS