| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1729 |
|---|
| Symbol | hpaI |
|---|
| ID | 3846052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2092830 |
|---|
| End bp | 2093645 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637839030 |
|---|
| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| Protein accession | YP_439923 |
|---|
| Protein GI | 83716329 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC CTGAGAATAC GTTCAAGGCC GCGCTCGCGC GCGGGCAGGC GCAGATCGGG
CTGTGGCTCG GGCTCGCGAA TCCTTATGCG GCGGAGGTCG TCGCGGGCGC GGGCTTCGAC
TGGCTGCTGA TCGACGGCGA GCACGCGCCG AACACGGTGC CGACGATCCT CGCGCAGTTG
CAGGCGATCG CCGCGTATCC GTCGCATCCC GTCGTGCGCG TGCCGTGGAA CGACGCGGTG
GCCGTCAAGC AGGTGCTCGA TCTCGGCGCG CAGACGCTGC TCGTGCCGAT GGTGCAGAGC
GCCGGCGAGG CGCGCGCGGC GGTGGCGGCG ACGCGCTATC CGCCGCACGG CGTGCGCGGC
GTCGGCAGCG CGCTCGCGCG CGCGTCGCGC TGGAATCGCG TCGACGATTA CCTGCGGCGC
GCGAACGAGC GGATCGCGGT GCTCGTGCAA GTGGAGACGC GCGCGGGGCT CGATGCGATC
GACGCGATCG CGCGCGTCGA CGGCGTCGAC GGCGTGTTCA TCGGGCCCGC CGATCTCGCG
GCCGATCTCG GGCACCTGGG CGAGCCCGCG CATCCTGACG TGCAGGCGGC GATCGACCGC
GCGATCGCCG CGATCGTCGC CGCGGGCAAG GCGGCGGGCA TCCTGTCGGC CGATCCGGCG
GCCGCGCGGC GTTATCTCGA CGCGGGCGCG ACGTTCGTCG CGGTTGGCGT CGACACGACG
CTGCTCGCGC GCGGCGCCGA GCGCCTTGCC GCGCAGTTCA AGCCGGCGGC CGGCGGCGGG
AGGGCGGGCG CGAGCGGGGG CGATGCGACG TATTGA
|
|---|
| Protein sequence | MRIPENTFKA ALARGQAQIG LWLGLANPYA AEVVAGAGFD WLLIDGEHAP NTVPTILAQL
QAIAAYPSHP VVRVPWNDAV AVKQVLDLGA QTLLVPMVQS AGEARAAVAA TRYPPHGVRG
VGSALARASR WNRVDDYLRR ANERIAVLVQ VETRAGLDAI DAIARVDGVD GVFIGPADLA
ADLGHLGEPA HPDVQAAIDR AIAAIVAAGK AAGILSADPA AARRYLDAGA TFVAVGVDTT
LLARGAERLA AQFKPAAGGG RAGASGGDAT Y
|
|---|
| |