Gene BTH_II1612 details

Gene Information

• Locus tag: BTH_II1612
• Symbol: soxR
• ID: 3846334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: -
• Start bp: 1889766
• End bp: 1890236
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637838913
• Product: redox-sensitive transcriptional activator SoxR
• Protein accession: YP_439807
• Protein GI: 83717488
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR01950] redox-sensitive transcriptional activator SoxR

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTGCA AAAGTGGTGA AAATGACCCG CTGCTGTCGA TCGGCGAAGT GTCGGCGCGC 
AGCGGCGTGG CCGCGTCCGC GCTGCGGTTC TACGAGTCGC GCGGGCTGAT CGCGTCGCAC 
CGGCGCGGCT CGAGCCATCG CTACTACCCG CGCTCGGTGC TGCGCCGCAT CGCGTTCATC 
GTGTTCGCGC AGCGGATCGG CTATTCGCTC GACGAGATCG CGGTGCAACT CGCGAGCCTG 
CCGGCCGACA CGCTGCCGAC GAACCGGGAC TGGCAGCGCC TGTCGCGGGA GTGGAAGAAG 
CGCGTCGCGG ACAAGATCGA GGAATTGCAG CGGCTCTACG TCGATCTCGA CGAATGCATC 
GGCTGCGGAT GCCTGTCGCT CAAGCGCTGC AAGCTGACGA ATCCCGACGA CCGCGCGTCG 
CGCGGCGGCC CGGGCGCGCG GCGGTGGCTC GGCGATCCGC CGGCGGTTTG A 

 

Protein sequence

MRCKSGENDP LLSIGEVSAR SGVAASALRF YESRGLIASH RRGSSHRYYP RSVLRRIAFI 
VFAQRIGYSL DEIAVQLASL PADTLPTNRD WQRLSREWKK RVADKIEELQ RLYVDLDECI 
GCGCLSLKRC KLTNPDDRAS RGGPGARRWL GDPPAV