| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1598 |
|---|
| Symbol | |
|---|
| ID | 3846510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1876665 |
|---|
| End bp | 1877801 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637838899 |
|---|
| Product | amino acid ABC transporter, periplasmic amino acid-binding protein, putative |
|---|
| Protein accession | YP_439793 |
|---|
| Protein GI | 83717937 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA ACAGATTGTT GCCGATCAGC GCGGCCGCGA TGGTGATGGC CGCGGCCTCG
ACGCATGCGC TGGCCGATCA GGTCGTGAAG ATCGGCAGCG CCGAACCCTT GACGGGCGGC
ATCGCCCACC TCGGCAAGGA CAACGAGAAC GGCGCGCGCC TCGCGGTCGA GGAAATCAAC
GCGAAGGGAC TCACGATCGG CGGCCAGAAG GTCACGCTCC AGCTCGACGC GCAGGACGAC
GCGGCCGACC CGCGCACCGC GACGCAGGTC GCGCAGAAGC TCGTCGACGG CAAGGTCGTC
GCGGTCATCG GGCACCTGAA CTCGGGCACG TCGATTCCCG CGTCGAAGAT CTACAACGAC
GCGGGCATCC TGCAGATCTC GCCGTCGGCG ACGAATCCGG CCTACACGCA GCAAGGCTTC
AAGACGACCT ACCGCGTCGT CGCGACCGAC GCGCAGCAGG GCCCGGCGCT CGCGAACTAC
GCGAAGCAAA AGGGGATCAA GACGGTCGCC GTCGTCGACG ATTCGACGGC CTACGGCCAG
GGCCTCGCGA ACGAGTTCGA GAAGAAGGCG AAGGCGCTCG GCCTGAAGGT GCTGTCGCAC
GACGCGACGA ACGACAAGGC GGTCGATTTC CGCGCGATCC TGACGAAGAT CAAGGGTACG
AACCCGGACG CGATCATGTA CGGCGGGATG GACGCCACCG GCGGCCCGTT CGCGAAGCAG
GCGAAGCAGC TCGGCCTGCG CGCGAAGATC CTCTCGGGCG ACGGCGTGTG CACCGAGCAG
TTGCCCGCGC TTGCCGGCAA TGCGGCCGAC AACGTCGTGT GCTCGCAGGC GGGCGCGGCG
CTCGAGAAGA TGCCGGGCGG CGCGGCGTTC CAGGCGAAGT ACGAGAAGCG CTTCAATCAG
CCGATCCGCT TCGACGCGCC GTTCACGTAC GACGCGGTGT ACATCATCGT CGACGCGATG
AAGCGCGCGA ACTCGACGGA CCCGGCGAAG ATTCTCGCGG TGATGCCGAA GACGCACTAC
ACGGGCGTGA TCGGCACGAC GGTCTTCGAT TCGAAGGGCG ACCTGCAACA CGGCGTGATT
TCGCTGTACG ACTACAAGGG CGGCAAGAAG ACCTTCCTCG ATCAGGTGAC GATGTAA
|
|---|
| Protein sequence | MKINRLLPIS AAAMVMAAAS THALADQVVK IGSAEPLTGG IAHLGKDNEN GARLAVEEIN
AKGLTIGGQK VTLQLDAQDD AADPRTATQV AQKLVDGKVV AVIGHLNSGT SIPASKIYND
AGILQISPSA TNPAYTQQGF KTTYRVVATD AQQGPALANY AKQKGIKTVA VVDDSTAYGQ
GLANEFEKKA KALGLKVLSH DATNDKAVDF RAILTKIKGT NPDAIMYGGM DATGGPFAKQ
AKQLGLRAKI LSGDGVCTEQ LPALAGNAAD NVVCSQAGAA LEKMPGGAAF QAKYEKRFNQ
PIRFDAPFTY DAVYIIVDAM KRANSTDPAK ILAVMPKTHY TGVIGTTVFD SKGDLQHGVI
SLYDYKGGKK TFLDQVTM
|
|---|
| |