Gene BTH_II1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1597 
Symbol 
ID3845958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1875766 
End bp1876386 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID637838898 
Producthemolysin III 
Protein accessionYP_439792 
Protein GI83716235 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATGTCG GTGAGCGTTT CAACAGCATT TCCCATCTCG TCGGCGCGGT GCTGTCGGTG 
GCGGGCCTCG CCACGCTCGT GACGATGGGC GCGCTCGACG GCGACGCTTA CAAGGTGGTG
AGCTTCAGCG TGTACGGCGC GATGCTGTGC GTGCTTTACG CGATCTCGAC GCTTTACCAC
AGCGTGCGTG GCCCGCGGCT GAAAGCCGTT CTGCAGAAAT GCGATCACTC GGCGATCTAC
CTGCTGATCG CGGGCAGCTA CACGCCGTTC ACGCTCGTCA CGCTGCGCGG GCCGTGGGGG
TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCCGCGTTCG GCATCGTGCA GGAGCTCACG
CTCGGGCGGC GCACGCGCAG CGTGTCGATG GTGCTGTACG TGTTGATGGG CTGGCTCGCG
CTCGTCGCGA TCCGCCCGCT CGTCCACGCG CTGCCCGCGG CGGGGACGGC GTGGCTCGTG
GCGGGCGGCG TCATCTACAG CGCCGGCATC TACTTCTTCA TCAACGACGA GCGCATCCGC
CACGGGCATG GCATCTGGCA CCTGTTCGTG CTGGCGGGCA GCCTGTGCCA GTTCGTCAGC
GTGGCGGGCT ACGTCGCGTG A
 
Protein sequence
MHVGERFNSI SHLVGAVLSV AGLATLVTMG ALDGDAYKVV SFSVYGAMLC VLYAISTLYH 
SVRGPRLKAV LQKCDHSAIY LLIAGSYTPF TLVTLRGPWG WSLFGVSWGL AAFGIVQELT
LGRRTRSVSM VLYVLMGWLA LVAIRPLVHA LPAAGTAWLV AGGVIYSAGI YFFINDERIR
HGHGIWHLFV LAGSLCQFVS VAGYVA