| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1584 |
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| Symbol | pbpC |
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| ID | 3844722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 1862032 |
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| End bp | 1864566 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637838885 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_439779 |
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| Protein GI | 83717775 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGT TCGCGTCGAC GCTCGCGCGG CGGGTCGCGC AAGCGGCCGT GCCGCAGTGG
GTTTGGCCGT TCGCCGGACC GGCCGGGTGG CCGTTCGGTT CGGCGTTCAC GGCGCTCGCG
CTCGGCCCCC TGCTCTTTGC GCCGCCCGTT CGGCCGCGCG CCCGGCAGAA TCCGCGCCCG
TGCGCCGCGC CGCGGCGCGC GGCGCTCCCG CGCGCGCGAA CGGCCGCGCG CCGCGCGCTC
GCCGCCGCGA TGCTCGCCGC GCCGCTCGCC GCGCACGCGC TGCCGGCCTA TGACGACGTG
CGCCGCGACT GGCGCAGCTC CGACTGGGTG CTGCTCGCGC GCGACGGCAC GCCGCTTCAG
CGCACGCGCG TCGATCTCGC CGAGCGGCGC GGCGACTGGG TCGCGCTCGC CGACGTGTCA
CCCGCGTTTC GCGAGGCGAT CGTCGTATCG GAGGACAAGC GCTTCTACGC GCACAGCGGC
GTCGACTGGC GCGGCATCGC GGGCGCCGCG TGGGGCAATC TGTGGAACGA GCGCACGCGC
GGCGCGTCGA CGGTGACGAT GCAACTGGCC GGCCTGCTGA GCGACACGCC GCGCCGCTCG
GGCCAGCGCT CGCTGCCGCA GAAGGCCGTG CAGGCGATGG ACGCGCTGCG GCTCGAGCGC
GGCTGGCGCA AGGACCAGAT CCTCGAGGCG TATCTGAATC TCGTGCCGTT TCGCGGCGAG
ACGGTCGGGC TCGACGCGAT GTCGCACGCG CTGTTCGGCA AGGCCCCGTC GGGGCTCGAC
GTGCGCGAAT CGGCCGTCGC CGCCGCGCTC GTGCGCGCGC CGAACGCGTC CGCCGCGAAG
GTCGCCGAGC GCGCGTGCCG AATCCTGCGC GACATGCGCG CGGCGCAGCC GTGCGAAGCG
CTCGACGGCT ACGTGCGCTT CGTCACGTCC GCCCCGCCGA ATGCCATGCG CGACGACGGC
GAAGCGCTCG CGCCGCACTT CGCGCGGCGC GTCGCGGCCG AGGCGAAGCC CGGCGCGGGC
GCGCGCGTGC GCTCGACGCT CGACGCGCCG CTGCAGCGCT TCGCGCGCGA CACGCTCACG
CGCGCACTCG CCGAGCTGAA CGCGCCCGCC CATCGGCGCA ACGTGCAGGA CGGCGCGCTC
GTCGTGATCG ACAACGCGAC GGGCGAGATC CGCGCCTGGG TGGGCTCGTC GGGCGCGCTG
TCGGCCGCGC GCGACGTCGA CGCGGTGCTC GCGCCGCGCC AGGCCGGCTC GACGCTCAAG
CCGTTTCTGT ACGCGCAGGC GATCGACGAG CGGCGGCTGA CCGCCGCGTC GCTGCTCGAC
GACGCGCCGA TCAACCTCGC CACGGGCGGC GGCCTGTACA TTCCGCAAAA CTACGACAGG
CACTTCAAGG GCTGGGTCAG CGTGCGCACC GCGCTCGGCG GATCGCTGAA CGTGCCCGCC
GTGCGCACGC TCGTGCTCGT GAGCCCGCAC CGCTTCGCGC GCACGCTGAC GGCGCTCGGG
CTGCCGCTCG CCGAAGAAGG CGACTACTAC GGCTTCAGCC TCGCGCTCGG CAGCGCCGAC
GTCACGCTGC TGTCGCTCGC GAACGCGTAT CGCGCGCTCG CGAACGGCGG CGTCGCGCGC
GCGACGCGCG ACATGCCGGG CGACAGCGGA AACGATGCGT TCGCGCCGCC GCGCGTCCCT
TCGGGCGTTT CGAAATCGAA GATCGCCACG CCCGCGGCTT CCGCGCGAGC GGTTTCCACG
GCGGCCGCTT CGAAGTCGGC GGGCTCCAGA CAGACGGCGC GGCCCGCGCG CGCCGCGGCC
GGCACGCGCG TATTCAGCGA AGCCGCGGCC TACATCGTCA CCGACATCCT CGCCGACAAC
AACGCGCGCG TACGCACGTT CGGCTTCGAC AGCCCGCTCG CGACGCGCTT CTTCTCCGCG
GTCAAGACGG GCACCAGCAA GGACATGCGC GACAACTGGG CGCTCGGCTA CACGTCGCGC
TACACGGTCG GCGTGTGGGT CGGCAACGCG GACGGCTCGC CGATGTGGGA CGTGTCCGGC
GTCACGGGCG CGGCGCCCGT GTGGGCCGCG ATCGTCGGCT ACCTGCACCG CGATCTCGCG
AGCCGCGCGC CGCGCCCGCC CGCGGGCGTC GAGCAGCGCC GCGTCGCGTT CGAGCGCGGC
GTCGAGCCCG CGCGCCCCGA GTGGTTCGTC GCCGGCACCG CGCTCGACAC GGTGCGGCTC
GCCGCGCCCG CGACAGCCGG CACCGGCGGG CCGCTTGCGA TCGGCGCGCC CACCGACGGC
ACGATCTTCG CGATCGATCC GGACATTCCG CCGAAGCATC AGCGGATCCG GTTCGAGCGC
GCGCCGGGCC ATGCGGAGCG CAGCTCGTGG CGGCTCGACG GCAAGGTGAT CGGACACGGC
GACAGGCTCG CGTGGATGCC GTGGCCGGGA ACGCACCGGC TCGAACTCGT CGACGCGCGC
GGCAACGTCG CGGACACGGT CGGCTTCGAG GTGCGCGGCG CGTTCGCGAG GACGGCGGCG
AATTCGGGGC GGTGA
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| Protein sequence | MSGFASTLAR RVAQAAVPQW VWPFAGPAGW PFGSAFTALA LGPLLFAPPV RPRARQNPRP
CAAPRRAALP RARTAARRAL AAAMLAAPLA AHALPAYDDV RRDWRSSDWV LLARDGTPLQ
RTRVDLAERR GDWVALADVS PAFREAIVVS EDKRFYAHSG VDWRGIAGAA WGNLWNERTR
GASTVTMQLA GLLSDTPRRS GQRSLPQKAV QAMDALRLER GWRKDQILEA YLNLVPFRGE
TVGLDAMSHA LFGKAPSGLD VRESAVAAAL VRAPNASAAK VAERACRILR DMRAAQPCEA
LDGYVRFVTS APPNAMRDDG EALAPHFARR VAAEAKPGAG ARVRSTLDAP LQRFARDTLT
RALAELNAPA HRRNVQDGAL VVIDNATGEI RAWVGSSGAL SAARDVDAVL APRQAGSTLK
PFLYAQAIDE RRLTAASLLD DAPINLATGG GLYIPQNYDR HFKGWVSVRT ALGGSLNVPA
VRTLVLVSPH RFARTLTALG LPLAEEGDYY GFSLALGSAD VTLLSLANAY RALANGGVAR
ATRDMPGDSG NDAFAPPRVP SGVSKSKIAT PAASARAVST AAASKSAGSR QTARPARAAA
GTRVFSEAAA YIVTDILADN NARVRTFGFD SPLATRFFSA VKTGTSKDMR DNWALGYTSR
YTVGVWVGNA DGSPMWDVSG VTGAAPVWAA IVGYLHRDLA SRAPRPPAGV EQRRVAFERG
VEPARPEWFV AGTALDTVRL AAPATAGTGG PLAIGAPTDG TIFAIDPDIP PKHQRIRFER
APGHAERSSW RLDGKVIGHG DRLAWMPWPG THRLELVDAR GNVADTVGFE VRGAFARTAA
NSGR
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