| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1550 |
|---|
| Symbol | |
|---|
| ID | 3846548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1821275 |
|---|
| End bp | 1823512 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637838851 |
|---|
| Product | DNA repair helicase |
|---|
| Protein accession | YP_439745 |
|---|
| Protein GI | 83717546 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGAAT TCACCGCGCG CGAGGGCGAT CTCGATCTGC GCTTCACGCC GGCGCCGAGC
GCGCTCGAAG GCATCGCCGG GCACGCGACG GTCGCGTCGC GGCGCGGCGC CGGCTACGAA
AAGGAGGTCG CGCTTTCGGG CGAGCACCGC GGCCTCACGG TGCGCGGCCG CGCGGACGGC
TACGATCCGG CGCTGAACCG CGTCGAGGAA ATCAAGACGC ATCGCGGCGA TCTCGACAGG
ATGCCCGCCA ATCAGCGCGC GCTGCATTGG GCGCAGGCGC GCGTGTACGG GCATCTGCTG
TGCGAATCGC GCGGGCTCGC GCAACTGAGC GTCGCGCTCG TCTATTTCGA TGTCGGGACG
CTGCGCGAGA CGGTGCTGAC CGAAACGCAC ACGGCCGCGA CGCTGAAGGC ATGCTTCGCG
GAGCAGTGCG AGCGCTTCGT CGACTGGGCG GCGCGCGAAG GCGCGCATCG CGTCGCGCGC
GATACGGCGC TGCGCGCGCT CGCGTTTCCG CACGCGCGCT TTCGCAGCGG CCAGCGCGAG
CTCGCGGTTG CGGCCTATCG CGCCGCGCGC GACGGCCGTG CGCTGCTCGC GCAGGCGCCG
ACGGGCATCG GCAAGACGCT CGGCACGCTG TTCCCGTTGC TGAAGGCATG CGCAGACGCG
CATCTGGACC GGATCTTCTT CCTGACCGCG AAGACGCCCG GCCGCGCGCT CGCGCTCGAC
GCGGCCGACA CGCTGCGCAC GGCCGCGGGC GGCGCGCTGC CGCTACGCGT GCTCGAGCTC
GTCGCGCGCG ACAAGGCGTG CGAGCATCCG GACGCCGCAT GCCACGGCGA ATCGTGTCCG
CTCGCGCGCG GCTTCTACGA TCGGCTCGCG GCCGCGCGCG CCGCCGCGCT CGAGCATGGC
CGGCTCGATC GCGCGACCGT GCGCGCGGCC GCGCTCGCGC ACGGCGTCTG CCCGTACTAT
CTCGCGCAGG AGCTCGCGCG CTGGTGCGAC GTCGTCGTCG GCGACTACAA CTACTACTAC
GACGGCAGCG CGCTGCTGCA CGCGCTCGCG CAGCAGAACC AGTGGCGCGT CGGCGTGCTC
GTCGACGAGG CGCACAACCT GCTCGACCGC GCGCGCGGGA TGTACAGCGC GGCGCTCGAC
CAGCGCGAGC TCGCCGGCGT GCGCAAGCTC GCCCCCGCGC CGCTCGCGAA GGCGCTCGAG
CGCCTGAATC GCGAATGGAA CGCGCTCAAT CGCGAACAGG CAGCCGCATA CGTCGTCCAT
CCGGATGTGC CGCCGCGCGT GCTGTCGGCC GCGCAGAACC TGATCGGGCG CTTCTCGGAG
CTCGCAGCCC AAGCGCCGCT CGCGCTCGAC GCTGCGGTGC AGCGCTTCTG TTTCGACGCG
ATTCACTTCG TCGCGCTCGC CGAGCAGTTC GGCGCGCATT CGATCTTCGA TGCGACGCGC
GTGCGCGCGA GCGCGCCGCG CCGCGCCGGC GCGTCGATCC TCTGCGTGCG CAACGTGATT
CCCGCCGACT TCCTCGCGCC GCGCCATGGC GCCGCGCGCG CGACCGTGAT GTTCTCGGGC
ACGCTCAGCC CGTTCGATTT CTACCGCGAC ACGCTCGGGT TGCCGGACGA CGCCGGCACG
CTCGACGTCG AAGGGCCGTT TCGCGCGGAG CAACTGACAG TGAAGGTCGC GTCGCACGTA
TCGACGCGCT GGCGTGACCG AGCGCGCTCG CTCGATCCGA TCGTCGAGCT GATCGCCGCG
CAGTACGCGG CGCGGCCGGG CAACTATCTC GGATTCCTGA GCAGCTTCGA GTATCTGCAG
CAGGTTGTCG CCCGGCTGCG CGAGCGCCAT CCGGCGCTGC CCGTCTGGGC GCAGGCGCCG
GGCATGGACG AGGCCGCGCG CGACGGGTTT CTCGCGCGCT TCGAGCCGAA CGGGCGGGGC
ATAGGCTTCG CGGTGCTGGG CGGCGCGTTC TCGGAGGGGG TCGATCTCGC CGGCGACCGG
CTGATCGGCG CATTCGTCGC GACGCTCGGA CTGCCGCAGG TCAACGACGT CAACGAGGAG
ATGCGGCGCG CGATGGAGGC GCGCTTCGGC CGCGGCTACG ACTACATCTA CCTGTTTCCG
GGTTTGCGCA AGGTCGTGCA GGCAGCGGGG CGGGTGATTC GCACCGAGCA CGACGAGGGC
GTGCTGCATC TGATCGACGA CCGTTTCCGG CGCGGCGAGG TGCGCCGGCT GTTGCCCCGG
TGGTGGCGGC TGAGCTGA
|
|---|
| Protein sequence | MCEFTAREGD LDLRFTPAPS ALEGIAGHAT VASRRGAGYE KEVALSGEHR GLTVRGRADG
YDPALNRVEE IKTHRGDLDR MPANQRALHW AQARVYGHLL CESRGLAQLS VALVYFDVGT
LRETVLTETH TAATLKACFA EQCERFVDWA AREGAHRVAR DTALRALAFP HARFRSGQRE
LAVAAYRAAR DGRALLAQAP TGIGKTLGTL FPLLKACADA HLDRIFFLTA KTPGRALALD
AADTLRTAAG GALPLRVLEL VARDKACEHP DAACHGESCP LARGFYDRLA AARAAALEHG
RLDRATVRAA ALAHGVCPYY LAQELARWCD VVVGDYNYYY DGSALLHALA QQNQWRVGVL
VDEAHNLLDR ARGMYSAALD QRELAGVRKL APAPLAKALE RLNREWNALN REQAAAYVVH
PDVPPRVLSA AQNLIGRFSE LAAQAPLALD AAVQRFCFDA IHFVALAEQF GAHSIFDATR
VRASAPRRAG ASILCVRNVI PADFLAPRHG AARATVMFSG TLSPFDFYRD TLGLPDDAGT
LDVEGPFRAE QLTVKVASHV STRWRDRARS LDPIVELIAA QYAARPGNYL GFLSSFEYLQ
QVVARLRERH PALPVWAQAP GMDEAARDGF LARFEPNGRG IGFAVLGGAF SEGVDLAGDR
LIGAFVATLG LPQVNDVNEE MRRAMEARFG RGYDYIYLFP GLRKVVQAAG RVIRTEHDEG
VLHLIDDRFR RGEVRRLLPR WWRLS
|
|---|
| |