Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1454 |
Symbol | |
ID | 3845559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1717177 |
End bp | 1718421 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637838756 |
Product | outer membrane porin OpcP |
Protein accession | YP_439650 |
Protein GI | 83716488 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.176502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCGGA ATGGGGCGCA GAAACGCCGA ACACATCGTG GCGGCCCGAC ATCCGCGAGG CCGCCGAATC AAGGTCTGGA GATATCGATA ATGAAAAAGC ACATCATTTC CGCTGCCGCA TTGCTCGCAT TCGCCGCGCC GGTTTTCGCC CAAAGCAGCG TCACGCTGTA CGGCGTGATC GACGAGGGTT TCAACTACAC GAGCAACGTG AACGTCAACG GCGTCGGCAA GAGCAACTAC CAGCTCGCGA GCGGCTTCGC GCAGGGCAGC CGCTGGGGCC TGCGCGGCTC GGAAGACCTG GGCGGCGGCC TGAAGGCCGT CTTCACGTTG GAAAATGGCT TCGACGTGAA TAACGGCCGG CTTGGCCAGG GCGGCCGGAT GTTCGGCCGC CAGGCGTTCG TCGGCCTGTC GCACGCGCAA TACGGTTCGC TCACGCTCGG CCGCCAGTAC GATTCGGTCG TCGACTACCT CGCGCCGCTG ACGGCGAACG GCAACTGGGG CGGCCTGCTG TTCTCGCACC CGTTCGACAA CGACAACACG GATAACTCGT TCCGTGTGAA CAACACGATC AAGTACGCGA GCCCGGACTG GAACGGTCTG CAAGTCGGCG GCACGTACAG CTTCAGCAAC GCGACGGGCT TCTCGAACAA CCGTCAATAC AGCATCGGCG CCGCGTACAC GCTGGGCGGC CTGCAACTCG CGGCCGCGTA CCTGCAGGCG AACAACCCGG GCAAGACGGC GGGCGGCGCG ATCGCCGACA ACGACGCGAA CTTCACGGCC GACCGCCTGC GCATCTTCGG CGGCGGCGTC AACTACACGT TCGGCCCGGC GACGGTCGGC TTCGTCTACA CGAAGACCGA CGTGAAGAAC CCGGTCTCGA CGGTCTATCT GCCGACGGCG ACGTTCGCGG GCCTCGGTCT GACCGCGACG AAGTTCCAGA ACTTCGAAAT CAACGGCAAG TACCAACTGA CGCCGGCGCT CTTCATCGGC GCGCAGTATG TGTACACGGA CGGCAAGTTC GACGCGGCTG CGGGCACGGT CAAGCCGAAG TACCACACGA TCGGCCTGAT GGCGGACTAC AACCTGTCGA AGCGCACCGA CGTCTATCTG CAGGGCGCAT ACCAGAAGGT TGCGGGCGAC AAGACGGGCA CGATCGCGGA TGGCGGCTAC GTCGTCGGCA CGGACGGCCC GTCGGCATCG GCGAACCAGT TCGCGGTCCG CGCGGCGATC CGTCACAAGT TCTGA
|
Protein sequence | MPRNGAQKRR THRGGPTSAR PPNQGLEISI MKKHIISAAA LLAFAAPVFA QSSVTLYGVI DEGFNYTSNV NVNGVGKSNY QLASGFAQGS RWGLRGSEDL GGGLKAVFTL ENGFDVNNGR LGQGGRMFGR QAFVGLSHAQ YGSLTLGRQY DSVVDYLAPL TANGNWGGLL FSHPFDNDNT DNSFRVNNTI KYASPDWNGL QVGGTYSFSN ATGFSNNRQY SIGAAYTLGG LQLAAAYLQA NNPGKTAGGA IADNDANFTA DRLRIFGGGV NYTFGPATVG FVYTKTDVKN PVSTVYLPTA TFAGLGLTAT KFQNFEINGK YQLTPALFIG AQYVYTDGKF DAAAGTVKPK YHTIGLMADY NLSKRTDVYL QGAYQKVAGD KTGTIADGGY VVGTDGPSAS ANQFAVRAAI RHKF
|
| |