| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1409 |
|---|
| Symbol | |
|---|
| ID | 3844642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1661008 |
|---|
| End bp | 1661721 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637838711 |
|---|
| Product | histidine ABC transporter, permease protein |
|---|
| Protein accession | YP_439605 |
|---|
| Protein GI | 83717832 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.169311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCAGA TCATCGGTCA ATATTGGCAG AACTACCTGT TCAGCGACGG CTACCGAATC
AGTGGCCTCG CGATCACGCT GTGGCTGCTC GTCGTGTCGA TCGGGCTCGG CTTCGGTCTC
GCGGTGCCGC TCGCGGTTGC GCGCGCGTCG CGCAACCGCG CGGTATCGGG CGCGGTGTGG
CTCTATACGT ACGTGTTCCG CGGCACGCCG CTCTATGTGC AACTGCTGCT CTGCTACACG
GGCATCTATA GCCTGAGCGT CGTGCACGAC CACGCGTGGC TCGACAGCTT CTTCCGGAGC
GCGATGAACT GCACGCTGCT CGCGTTCACG CTGAACGAAT GCGCGTATGC GACGGAGATC
TTCGCGGGCG CGATCAAATC GACGGCGCCG GGCGAGATCG AGGCGGGGCT TGCGTACGGG
ATGTCGCGCT TCAAGCTGTA CACGCGGGTG ATCCTGCCGT CGGCGCTGCG CCGCGCGCTG
CCGAGCTACA GCAACGAAGT GATCCTGATG CTGCATGCGA CGACGCTCGC GTTCACCGCG
ACGGTGCCCG ACATCCTGAA AGTCACGCGC GACGTCAATT CGGCAACCTA TGCATCGTTT
CAGGCGTACG GAATCGCGGC CGCGCTGTAT GCCCTCATCG TGTTCGCGTT GATCTGGGTG
TTCCGCAGGA TGGAGGCGCG CTGGCTCGCG TATCTGAGGC CGCAGGGGCA TTGA
|
|---|
| Protein sequence | MIQIIGQYWQ NYLFSDGYRI SGLAITLWLL VVSIGLGFGL AVPLAVARAS RNRAVSGAVW
LYTYVFRGTP LYVQLLLCYT GIYSLSVVHD HAWLDSFFRS AMNCTLLAFT LNECAYATEI
FAGAIKSTAP GEIEAGLAYG MSRFKLYTRV ILPSALRRAL PSYSNEVILM LHATTLAFTA
TVPDILKVTR DVNSATYASF QAYGIAAALY ALIVFALIWV FRRMEARWLA YLRPQGH
|
|---|
| |