Gene BTH_II1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1393 
Symbol 
ID3845130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1644299 
End bp1645444 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID637838695 
Productcalcium/proton exchanger 
Protein accessionYP_439589 
Protein GI83716371 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.107806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGACC GCCTGTTAGA ATCGCTGCTC GCGCCCTGCC ACGACCAAGG ACACTCCATG 
CCGATCTCTT CGCCCGCCCT TCCGCGCTGG ACGCTCGCCG CCCCGCTCGC CGCCTGGCTG
GTGCTCGCGC TGTCGCGCGT CGTGCCGGCC GAAGGCATCG TCATCGCATT CGTCGCGGCC
GCGCTCGCGG GCGCCGTGTT CTCCGCCGTT CACCACGCCG AAGTCGTCGC GCACCGCGTC
GGCGAGCCGT TCGGCACGCT CGTGCTCGCG ATCGCCGTCA CCGTGATCGA GGTCGCGCTG
ATCGTATCGG TGATGCTGTC GGCCGGTCCC GAGAAAGCGG GGCTTGCGCG CGACACAGTG
TTCGCCGCGG TGATGATCGT CTGCAACGGG ATCGTCGGGC TGTGCCTGCT CGTCGGCGGC
TGGAGGCACG GCGAGCAGGA TTTCCAGGGG CGCGGCGCGA CGAAGGCGCT CGCGGTGCTC
GCGTCGCTGT CGGTGCTCTC GCTCGTGATG CCGAACTATC TGAGCGCCGC GCCCGGCCCG
AGGCTGTCGA CGTCGCAGCT CGCGTTCGCC GGCGTGTCGT CGCTCGTGCT GTACGGCGTG
TTCGTGTTCG TGCAGACGGT TCGCCACCGC GACTACTTCC TGATCGACGG CAGCAACGCC
GACGAATCCG TCCACGCGGT GCCGCCGAGC GGCCGCACCA CGCTCGTCAG CATCGTGTCC
CTGTTCGTGA GCCTCGTCGC GGTCGTGCTG CTCGCGAAAC TGCTGTCGCC CGCGGTCGAG
CGCACGGTGT TGCGGCTCGG CGCGCCCGAG GCGGCCGTTG GCATCGTGAT CGCCGCGCTC
GTGCTGCTGC CGGAGGGGCT CGCCGCCGTC GGCGCGGCGC GCGCGAACCG GCTGCAAACG
AGCATGAATC TCGCGCTCGG CTCCGCGCTC GCGAGCATCG GCCTCACGAT TCCGACCGTC
GCCGCCGTGT TCATCTGGAC GGGCAATCCG CTCACGCTCG GCATCGGCGG AATGGAGACG
GTGCTGCTGT CGCTCACGCT GCTCGTCAGC ACGCTCACGC TCAGCATGGG ACGCACGACG
GTGCTGCACG GCGTCGTCCA TCTGTCGCTG TTCGCCGCGT ATCTGTTCCT GTCCGTCACG
CACTGA
 
Protein sequence
MPDRLLESLL APCHDQGHSM PISSPALPRW TLAAPLAAWL VLALSRVVPA EGIVIAFVAA 
ALAGAVFSAV HHAEVVAHRV GEPFGTLVLA IAVTVIEVAL IVSVMLSAGP EKAGLARDTV
FAAVMIVCNG IVGLCLLVGG WRHGEQDFQG RGATKALAVL ASLSVLSLVM PNYLSAAPGP
RLSTSQLAFA GVSSLVLYGV FVFVQTVRHR DYFLIDGSNA DESVHAVPPS GRTTLVSIVS
LFVSLVAVVL LAKLLSPAVE RTVLRLGAPE AAVGIVIAAL VLLPEGLAAV GAARANRLQT
SMNLALGSAL ASIGLTIPTV AAVFIWTGNP LTLGIGGMET VLLSLTLLVS TLTLSMGRTT
VLHGVVHLSL FAAYLFLSVT H