| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1386 |
|---|
| Symbol | |
|---|
| ID | 3845099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1636480 |
|---|
| End bp | 1637292 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 637838688 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_439582 |
|---|
| Protein GI | 83716066 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0048642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ATCTCGATCC AGCCGTTGCG CCGGAATCCG ACGAACCGGG GCTGTACGCG
CTGTCGGCTT TCGTCGACGG CGAACTGCCC GATGCGCAGC GCCGTGCGGT CGCCGTGCGG
CTCGCGGCCG ATCCGCGCGC GGCCGACATC GCCGCGCACT ATCGCGCGCA GCGCGCGGCG
CTGCGCGCGC TGTTTGCCGA TCCCGTCGCG CGGCGCAGCG GGCCGTGCGT CGTGCTGCGC
GTGCGCACGC CGTGGTGGCG GCGCGCGGTG TTCGCGGGCG GCGCGCTGGC GGCGGGCATC
GCGCTCGGCT GGCTCGGCGG CGTGCTCGCG CCGTCGGCCG CGCTGCGATG GGTCGCGCCC
GCGGCCGCGC AGGCCGCGTT CGCGCGCGAG GCGGATCTCG CGTATGCGGT CTACGCGCCC
GACGCGCGGC ACCCGGTCGA GATCGCCGCC GATCGCGACG GCGCGCTTTC CGCGTGGTTG
TCGGCACGCG TCGGCCGGCG GATCGCCGCG CCGCGGCTCG ACGAATACGG CTTCGCGCTG
CTCGGCGCGC GGCTGCTGCC GGGCGCGGCC GGCCCCACCG CGCAGTTCAT GTACGAAAAC
GCGGCGGGGG GGCGGCTCGC GCTCTACGTG AGCGCGTCCG CGCAGCGCGA GATGGCGGTC
CGGCTGCTGC GCGACGGCGA GCGGCGCACC TTCTACTGGG CCAGCGGGCG CACCGCGTAC
GCGCTGTCCG GCCAACTCGC CGAAGACCGG CTGCGCGAGA TCGCGGCCGA CGTCTGCGGC
GAGCTCGGCG GCCATCCGGA GCGGTGGCGG TAG
|
|---|
| Protein sequence | MSDDLDPAVA PESDEPGLYA LSAFVDGELP DAQRRAVAVR LAADPRAADI AAHYRAQRAA
LRALFADPVA RRSGPCVVLR VRTPWWRRAV FAGGALAAGI ALGWLGGVLA PSAALRWVAP
AAAQAAFARE ADLAYAVYAP DARHPVEIAA DRDGALSAWL SARVGRRIAA PRLDEYGFAL
LGARLLPGAA GPTAQFMYEN AAGGRLALYV SASAQREMAV RLLRDGERRT FYWASGRTAY
ALSGQLAEDR LREIAADVCG ELGGHPERWR
|
|---|
| |