| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1381 |
|---|
| Symbol | |
|---|
| ID | 3844534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1630820 |
|---|
| End bp | 1633048 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637838683 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_439577 |
|---|
| Protein GI | 83717123 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00176773 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAGCC CCGGCCTGCA CGGTCGCGCG GATGCGGCCG CGGCGCTCGA CCGGCTGCTG
ACGGGCACGG GCCTCGTCGC GCTGCGGCAG CCGAGCGGCG GCTACACGCT CGTCAGGTCG
CCCGCCGGGC CGGCCGCGCC GAGCGCGGGG GCGGCGCTCG CGACCGACAC GACGCTGCCG
ACCGTCTCGG TGCGCGCGAG CGGCCTGCAC GCGGACAGCT ACCGTGCGCC GCGCGAGGCG
GCGGGGCTGC GCAGCGACGC GCCGCTCGCC GAGGTGCCGC AGGCCGTCAA CATCGTTGCG
CCGCAGGTGC TGCGCGACCA GCGCCCGCGC AACCTCGACG ACGCGCTCGC GAACGTGAGC
GGCATCACGC AGGGCAACAC GCTCGGCAGC ACGCAGGACA CGGTGATGAA GCGCGGCTTC
GGCGACAACC GCGACGGCTC GGTGATGCGC AACGGGATGC CGATCGTGCA GGGCCGCTCG
CTGAACGCGA CGACGGACAG CGTCGAAGTG CTGAAGGGGC CGGCTTCGCT GCTGTACGGG
ATCATGGACC CGGGCGGCGT GATCAACGTC GTCACGAAGC AGCCGCAGCT CACGCGCCAC
AACGCGATCT CGGTGCTCGG CTCGACCTAC GGGCACGGCA GGAATGGCGG CGAGCTCACG
TTCGACTCGA CGGGCGCGAT CGGCGATTCG CGGCTTGCGT ACCGGCTGAT CGTCGATCAG
ACGAACGAGC AGTACTGGCG CGACTACGGC GAGCATCGCG AGACGCTCGT CGCGCCGTCG
CTCGCGTGGT ACGGCCGCGA CACGCAGGTC GTGCTGTCGT ACGAGTACCG GCGCTTCCTG
ATGCCGTTCG ATCGGGGCAC CGCGCTCGAT CCGCGCACGA ACGAGCCGCT CGCGATCCCG
GCGCGCCGCC GCCTCGACGA GCCGTTCAAC GACATGCGCG GCGAATCGAA TCTGGTGCAA
CTAACGGTCG ACCATCAGCT CGCGCCCAAC TGGAAGGCGC ACCTCGGCTA CAGCTACAAC
CGCGAGACCT ACGATGCGAA CCAGATACGC ATCACGGCGG TCGATCCGGT CAAGGGCACG
CTCACGCGCA GCAACGACGC GACGCACGGC TCGCGCAGCA CCGACAGCTA CGCAATCGCA
TACGTCGACG GCCGCGTGAC GCTCGCCGGG ATGCGGCACG ACGTGCAGTT CGGCGTCGAC
AGCGAATACC GGCAGGTCTA CCGCGCGGAC ATGCTGCGCC AGGCGATCAA GACGCCGTTC
AGCTACCTGA ACCCGACGTA CGGGCTGATC CCGCCGTCGA CGAGCGTATC GGCGTCCGAC
AGCGATCAGA GCGACACGCT GCACACCGCG TCGCTGTTCT TCCAGGACAG CATCCATCTG
ACCGACAAGT GGATTCTCGT CGGCGGCGCG CGCTTCGTCC GCTACAGCCA GCTCGCCGGG
CGCGGCCGGC CGTTCCGGGT CAACACGAAC CTGAGCGGCA CGAAGTGGCT GCCGCGCGCG
GGCATCGTCT ACAAGTGGAA CGACGCGCTG TCGCTGTACG GCAGCTACAC GCAGTCGCTG
AAGCCGACGT CGAAGATCGC GCCGATGTCG GGCGGCTACG TGATCGACGG CTCGACCGCG
CCCGAGCAGG GCGCGTCGTG GGAGCTCGGC GCGAAGCTCG ACCTGCCGAG CGGCTTCGCC
GGCACGCTCG CGTTCTTCGA GATCGACAAG AAGAACGTGC TCGTGTCGCA ATACAACGAC
GCGACGAACC AGACCGACTG GCGCACGTCC GGACGCGCGC GCTCGCGCGG GATCGAGCTC
GACGTGTCGG GGCGGATCGG CGAGCGCTGG AACGTGATCG CGAGCTACGC GTACATCGAT
GCGAAGACGA CCGAAGATCC GCTGTACGCG GGCAACCGGC TGTGGAACGT CGCGCGGCAC
ACGGCGTCGC TCGCGGCCGT CTACGACGCG GGCGCCGTGT TCGGCGGCGA CGACCTGCGG
ATCGGCGCGG CGGGGCGCTA CGTCGGCGCG CGGCCGGGCG ATTCGGCGAA CAGCTTCACG
CTGCCCGCGT ACGCGACGGC CGATGCTTTC GCGACCTACG ACACGCGCGT CGGCAAGCAG
AAGCTGCAGT TCCAGCTGAA CGTGAAGAAC CTGTTCAACC GCACGTATTA CCCGTCGAGC
GTGAACCGGT TCTTCGTGTC GGTCGGCGAT GCGCGGCAGG TGTCGCTGCT GACGACGCTG
CAGTTCTGA
|
|---|
| Protein sequence | MQSPGLHGRA DAAAALDRLL TGTGLVALRQ PSGGYTLVRS PAGPAAPSAG AALATDTTLP
TVSVRASGLH ADSYRAPREA AGLRSDAPLA EVPQAVNIVA PQVLRDQRPR NLDDALANVS
GITQGNTLGS TQDTVMKRGF GDNRDGSVMR NGMPIVQGRS LNATTDSVEV LKGPASLLYG
IMDPGGVINV VTKQPQLTRH NAISVLGSTY GHGRNGGELT FDSTGAIGDS RLAYRLIVDQ
TNEQYWRDYG EHRETLVAPS LAWYGRDTQV VLSYEYRRFL MPFDRGTALD PRTNEPLAIP
ARRRLDEPFN DMRGESNLVQ LTVDHQLAPN WKAHLGYSYN RETYDANQIR ITAVDPVKGT
LTRSNDATHG SRSTDSYAIA YVDGRVTLAG MRHDVQFGVD SEYRQVYRAD MLRQAIKTPF
SYLNPTYGLI PPSTSVSASD SDQSDTLHTA SLFFQDSIHL TDKWILVGGA RFVRYSQLAG
RGRPFRVNTN LSGTKWLPRA GIVYKWNDAL SLYGSYTQSL KPTSKIAPMS GGYVIDGSTA
PEQGASWELG AKLDLPSGFA GTLAFFEIDK KNVLVSQYND ATNQTDWRTS GRARSRGIEL
DVSGRIGERW NVIASYAYID AKTTEDPLYA GNRLWNVARH TASLAAVYDA GAVFGGDDLR
IGAAGRYVGA RPGDSANSFT LPAYATADAF ATYDTRVGKQ KLQFQLNVKN LFNRTYYPSS
VNRFFVSVGD ARQVSLLTTL QF
|
|---|
| |