Gene BTH_II1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1299 
Symbol 
ID3846692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1548952 
End bp1549656 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID637838601 
Productserine protease 
Protein accessionYP_439495 
Protein GI83716912 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.342347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCA GGGCCGCTCA GGGCCGCGCG GCATCGGCGC GAACGACACG ATGTCGGCAT 
AATGACCGGC GACGCCTCAC TCTTTCTTCC GCGGCCGCCA TGACGCTCGC CATCGTCGTC
CTGAACCTGA TCGGCTTCCT CGTCGAGCTT GCCGATCCCG ACCGAGTGCT GTCGATGTTC
GCGCTATGGC CGCCGGTTCC CGGCGCGGGC GGGCCATCCG CCGCGCCCGC GTTTCACGTC
TGGCAGATCG TGACGTACAG CGCGCTGCAC GCGGGGCTGT CGCACCTGTT GTTCAACATG
CTCGGGCTCG TGATGTTCGG CCGCGACGTC GAGCGCGCGC TCGGCCGCGC GCGCTTCGGC
GCGGTTTATC TCGCGAGCGT CGTGTGCGGC GCGCTCACGC AGCTCGCGGT CGCGCGTTAT
ACGGCGGCGG GCGCCGCGCC GACGATCGGT GCGTCGGCGG GCGTGTTCGG CGTGCTTGCC
GCGTATGCGC TGCTGTACCC GTCGCGCCGC GTCGTCCTGC TGATTCCGCC GATTCCGATG
CGAGCATGGG TGTGCGCGCT GCTCTACGCG GGCGTCGAGC TGCTGCTCGG CGTCGCGGGC
GCGGCGAGCG GCATCGCGCA TTTCGCGCAT CTGGGCGGGA TGTTCGGCGC GGTCGCGCTG
ATGCTGTTCT GGGCGCGGTC GCGAAAGGCG CGGCCGCTCG AATGA
 
Protein sequence
MPLRAAQGRA ASARTTRCRH NDRRRLTLSS AAAMTLAIVV LNLIGFLVEL ADPDRVLSMF 
ALWPPVPGAG GPSAAPAFHV WQIVTYSALH AGLSHLLFNM LGLVMFGRDV ERALGRARFG
AVYLASVVCG ALTQLAVARY TAAGAAPTIG ASAGVFGVLA AYALLYPSRR VVLLIPPIPM
RAWVCALLYA GVELLLGVAG AASGIAHFAH LGGMFGAVAL MLFWARSRKA RPLE