Gene BTH_II1298 details

Gene Information

• Locus tag: BTH_II1298
• ID: 3844540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 1546857
• End bp: 1548845
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637838600
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_439494
• Protein GI: 83717168
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.231073
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCG AAACCGGATA TTTGGGATTC GTCGTCGTGC TCGTGTTCAT GGTGCTGCTC 
GCGCTGCAGC TCGCGACGCT CAGCGCGCCC GCGACGCAGA TCGCATACAG CGACTTCCGC 
AAGCTCGCCT CGGCCGCGCA GGTCGACGAT CTCGAAGTCA GCCCGACGAG AATCACCGGC 
GTGCTGCGCA ACGCGGCCGC GGCGGCGGCG CTGCCCGCGT CCGATGCGCA AGCACTCAAG 
CGCGCGGGCG CGCCGTGGCG CTTCTCGACG AAGCGCGTGA CCGACGAGCG GCTGATCGAC 
ACGCTCACGG CGACGGGCAC CCGCTATCGC GGCGCCGACG ACGACACGTG GATCGGCACG 
CTCGCATCGT GGATCGTGCC GATCGCGGTG TTCGCGATCG TCTGGAACCT GATGCTGCGG 
CGTCCGCGCG GCGGCCTGCA GGACTGGTCG GGCGTCGGCA AGAGCAAGCC GCGCGTCTAC 
ATGGAGGCGA AGACCGGCAT CGATTTCGAC GACATCGCGG GCATCGACGA GGCGAAGGCC 
GAGCTTCAGC AGATCGTCGC GTTCCTGCGC GCGCCCGCGC GCTACCAGCG GCTCGGCGGC 
AAGATCCCGA AGGGCGTGCT GATCGTCGGC GCGCCCGGCA CCGGCAAGAC GCTGCTCGCG 
AAGGCGGTCG CGGGCGAGGC GGGCGTGCCG TTTTTCTCGA CGAGCGGCTC GTCGTTCGTC 
GAGATGTTCG TCGGCGTCGG CGCGGCGCGC GTGCGCGATC TGTTCGAGCA GGCGCAGCAG 
AAGGCGCCGT GCATCATCTT CATCGACGAG CTCGACGCGC TCGGCAAGGT TCGCGGCGCG 
GGCCTCGCGT CGGGCAACGA CGAGCGCGAG CAGACGCTGA ACCAGTTGCT CGTCGAGATG 
GACGGGTTCC AGGCGAACTC GGGCGTGATC CTCATGGCGG CGACCAATCG TCCGGAGATT 
CTCGATCCGG CGCTGCTGCG CCCGGGCCGC TTCGACCGGC ACATCGCGAT CGACCGGCCG 
GATCTGACGG GGCGCCGGCA GATCCTGTCG GTCCACGTGA AGCACGTGAA GCTCGGGCCG 
GACGTCGATC TCGGCGAGCT CGCGTCGCGC ACGCCCGGCT TCGTCGGCGC GGATCTCGCG 
AACATCGTCA ACGAGGCGGC GCTGCACGCG GCCGAGCTCG ACAAGCCGGC GATCGACATG 
TCCGATTTCG ACGAGGCGAT CGACCGCGCG ATGACCGGCA TGGAACGCAA GAGCCGCGTG 
ATGAGCGAGC GGGAGAAGAT CACGATCGCG CATCACGAGG CGGGGCACGC GCTGATCGCG 
CAAACCCGCG CACACAGCGA TCCGGTGAAG AAGGTGTCGA TCATCCCGCG CGGCATCGCG 
GCGCTCGGCT ACACGCAGCA GGTGCCGACC GAGGATCGCT ACGTGCTGCG CAAGAGCGAA 
CTGCTCGATC GGCTCGACGT GCTGCTCGGC GGGCGCGTCG CCGAGGAAAT CGTGTTCGGC 
GACGTGTCGA CGGGCGCGGA GAACGATCTC GAGCGCGCGA CCGAAATGGC GCGGCACATG 
GTCGCCCGGT ACGGGATGAG CGAGCGGATC GGCCTCGCGA CGTTCGGCGA CGGAGAAGGG 
CCGGGCCTGC CGCCCGTCGT CTGGCAGCGC GGCGGCGAGC GCTGCAGCGA GAGCACCGCG 
ACGCGGATCG ACGACGAGAT ACAGCGGCTC CTCGCCGAAG CGCACGATCG CGTGTCGCGG 
ACGCTGAAGG AGCGGCGCGG CGCGCTCGAT CGGATTGCGC AGTATCTGCT GAAGCACGAG 
GTCGTCGACC ACGACCGGCT CGTGAAGCTC GTCAACGACG AGCCGGTGCC GCAAAGCGAT 
GCGGGCGGCG ACACGGCGCA ACTCGGCGGC GGCGATCCCG CTTTCGCGCC GGCGAAACCG 
GCGGTGGACG CCGGCCAGCC CGATGTCACC GACACAACCG ATAAAGCCGA TCAGTCCGTG 
CCGCAGTGA 

 

Protein sequence

MKSETGYLGF VVVLVFMVLL ALQLATLSAP ATQIAYSDFR KLASAAQVDD LEVSPTRITG 
VLRNAAAAAA LPASDAQALK RAGAPWRFST KRVTDERLID TLTATGTRYR GADDDTWIGT 
LASWIVPIAV FAIVWNLMLR RPRGGLQDWS GVGKSKPRVY MEAKTGIDFD DIAGIDEAKA 
ELQQIVAFLR APARYQRLGG KIPKGVLIVG APGTGKTLLA KAVAGEAGVP FFSTSGSSFV 
EMFVGVGAAR VRDLFEQAQQ KAPCIIFIDE LDALGKVRGA GLASGNDERE QTLNQLLVEM 
DGFQANSGVI LMAATNRPEI LDPALLRPGR FDRHIAIDRP DLTGRRQILS VHVKHVKLGP 
DVDLGELASR TPGFVGADLA NIVNEAALHA AELDKPAIDM SDFDEAIDRA MTGMERKSRV 
MSEREKITIA HHEAGHALIA QTRAHSDPVK KVSIIPRGIA ALGYTQQVPT EDRYVLRKSE 
LLDRLDVLLG GRVAEEIVFG DVSTGAENDL ERATEMARHM VARYGMSERI GLATFGDGEG 
PGLPPVVWQR GGERCSESTA TRIDDEIQRL LAEAHDRVSR TLKERRGALD RIAQYLLKHE 
VVDHDRLVKL VNDEPVPQSD AGGDTAQLGG GDPAFAPAKP AVDAGQPDVT DTTDKADQSV 
PQ