Gene BTH_II1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1171 
SymbolnirD 
ID3845597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand+ 
Start bp1365920 
End bp1366273 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content69% 
IMG OID637838474 
Productnitrite reductase [NAD(P)H], small subunit 
Protein accessionYP_439368 
Protein GI83716467 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.106573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC AACGTCATGC ATCCGCTTGG ACGCCCGTGT GCGCGCTCGA CGAGATCGTG 
CCGAACACCG GCGTGTGCGC GCTCGTCAAC GGCGAGCAGG TGGCCGTGTT CCATGTCGAC 
GCCGGCGACG GCGGCCGCGC GTTCGCGATC GGCAACGTCG ATCCGCATTC GCAGGCCGCC 
GTGCTGTCGC GCGGGCTGAT CGGCAGCCTG GGCGAGCGGA TCGTCGTCGC GTCGCCGCTC 
TACAAGCATC ACTTCGACCT GCGCACGGGC GAGTGCGTCG AGGCGCCGGA CAAGTCGGTG 
AGCGCGTATG CGTCGCGCAT CGAGGACGGC TACGTGTGGG TCGCGGCGGC GTAA
 
Protein sequence
MNSQRHASAW TPVCALDEIV PNTGVCALVN GEQVAVFHVD AGDGGRAFAI GNVDPHSQAA 
VLSRGLIGSL GERIVVASPL YKHHFDLRTG ECVEAPDKSV SAYASRIEDG YVWVAAA