| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1138 |
|---|
| Symbol | |
|---|
| ID | 3845052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 1324607 |
|---|
| End bp | 1326730 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637838441 |
|---|
| Product | ABC transporter, permease/ATP-binding protein |
|---|
| Protein accession | YP_439335 |
|---|
| Protein GI | 83717714 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.121272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTCA ATACAAATAA AGTCAGGCCC ATTCTTCAGG ACGAGGTGAC CGAGTGCGGT
CTCGCGTGCC TTGCGATGAT CGCCACTTGG CACGGCCGCG ACACGACGTT GCGCACGCTG
CGCAACCGGT ATCCGGTCAA GATCGATTCC GGCCTGTCGT TCTTCGATCT GATGGAGATC
TCGAACGACC TCGGGATGCG CGCGCGCGGG CTCCAGTTCG AAGCGAACGA GATCGACGCG
CTGAAGCTGC CCTGCATCCT GCACTGGGGG ATGAACCACT ATGTCGTGCT GACGAAGGTC
GGCTACGGCA GCGTGCACAT CGTCGATCCG GCGCTCGGCG AGACCAAGCT GCCGCTCGCG
CAGGCGCTCA CCCAGATCAC GGGCTACGCG CTCGAGCTCA ATCCGGACAT CGGCTTCAAG
CATGTCGGCA CGTCGGACAA GATTCGCCTG AGCGACTATC TGGTGGGCCT CACGGGCATC
CGCAAGAGCA TCCTGCTCGG CGTCGCGGGC GGCATCGCCG CACAGTTGCT GCTGCTGCTC
GGGCCGTCGT ACGTGCAGTT GACGATCGAT GAGGCGCTGA AGAAGACCGA CGTCGACATT
CTGTACCTGC TGACGATCCT GTTCGGCATC GTGTTCCTGT TCGACACGCT GTACGCGAAC
CTCGTCGGCA ACATCAAGAG CTACCTGCGC AACATCGTGT CGCAGCAGCT GTCCGCGAAC
ATGGTCGGGC ATCTCGCGCG GCTGCCGATC GGCTATTACC TGTTCCACAA CACGGGCGAC
TCGATCTCGC GCGTGTCGTC GGTGTCGGAA ATCGGCCGGT TTCTCGTCGA CGGGCTGATC
GGCGGGCTGC TCAACGTGTT CACGTGCGTG ATCACCCTCG TGCTGATGCT GTACTACAGC
CCGGTGCTCG CCGGCATCAG CCTCGCGGGG ATGGTGCTGT TCGCGCTGTC GCGGCTCGCG
ATCCAGCCGC AACTGCAGGA TGCGATGTCG CAGATCCTCA CGCGCGGCGC CGAGGCCGAC
GCGCTGCTCA TCGAGAACAT CCGCTCCGCG CATTCGATCA AGCTGCTGTC GTCGGAGACC
TCGCGCAGCA GCCTGTGGGT GAACGCGTTC ACGCAGAAGC TGCAGGCGGT GCGCCAGCAG
GAGCGGCTGC AACTGCTGTT CGATGCGATC TCGAAGGGCA TCGTCCACGT CGAGCAGCTC
GTGATCGTCA CGTACGGCGC GTGGCTCGTG ATGCACGGGC AGAGCACGAT CGGCATCATC
TACGCGTTCA TCCAATACAA GAACCTGTTC GCCGACAAGT TCGTCGATTC GATTCAGCTC
TACGTGCGGC GCAAGGTGCT GCAGGTCCAC ATGGACCGCG TCGCCGACGT GCTGCAGACC
GAGACCGAGG AGCCCGCGCC CGACGCGCCG GTGCGCTCGA TCGAGCATTT CGACGGCTCG
CTGTCGATCC GTGCGCTGAC GTACACGCCG AAGGGCGGCC GTCGTGCGAT TCTCGAAGAC
GTGAATCTCG ACGTGCCCGC CGGCGCGAAG ATCGCGATCG TCGGCCGCAC CGGCAGCGGC
AAGACGACGC TCCTGAACCT GATCTGCGGG CTGTACCAGC CGGCGCCCGG CTCGCTGTTC
GTGGGCGGCG TCGATTTGTC CGAGGTGAAC CTGAGACTCT ACCGGAAGCA CGTCGCGGCG
GTCACGCAAT CGGATCAGCT GTTCCGCGGC ACGATCCGCG ACAACATCAC GAACTTCGCG
CCCGCGCCGC GCTTGGGCGC GATGCACGAG GCCGCGCGCC TCGCGTGCAT CGACCGCGAC
ATCGACGTGC TCGACAACCG CTACGACACG CCGCTCGGCG ACACGCAGAA GTTCCTGTCG
GCGGGCCAGA TGCAGCGCCT GCTGATCGCG CGCGCGCTGT ATTGCGAGCC GCGGCTTTTG
ATTCTCGATG AGTTCTCGTC GAACCTCGAT CAGGCGACCA CGCATGAGAT CTGCCGCAAC
GTGCTGATGC TGCCGTGCAC GATCGTGCTC GTCACGCACG ACGCGTCGAT CCTGTCGATG
GTCGATCGCA TCTACGAGAT GCGCGACGGC CGCCTGGCCG ACATCACGCC CGCGCGGCAA
CCGGAACTGG AGGTGCAGAA ATGA
|
|---|
| Protein sequence | MWFNTNKVRP ILQDEVTECG LACLAMIATW HGRDTTLRTL RNRYPVKIDS GLSFFDLMEI
SNDLGMRARG LQFEANEIDA LKLPCILHWG MNHYVVLTKV GYGSVHIVDP ALGETKLPLA
QALTQITGYA LELNPDIGFK HVGTSDKIRL SDYLVGLTGI RKSILLGVAG GIAAQLLLLL
GPSYVQLTID EALKKTDVDI LYLLTILFGI VFLFDTLYAN LVGNIKSYLR NIVSQQLSAN
MVGHLARLPI GYYLFHNTGD SISRVSSVSE IGRFLVDGLI GGLLNVFTCV ITLVLMLYYS
PVLAGISLAG MVLFALSRLA IQPQLQDAMS QILTRGAEAD ALLIENIRSA HSIKLLSSET
SRSSLWVNAF TQKLQAVRQQ ERLQLLFDAI SKGIVHVEQL VIVTYGAWLV MHGQSTIGII
YAFIQYKNLF ADKFVDSIQL YVRRKVLQVH MDRVADVLQT ETEEPAPDAP VRSIEHFDGS
LSIRALTYTP KGGRRAILED VNLDVPAGAK IAIVGRTGSG KTTLLNLICG LYQPAPGSLF
VGGVDLSEVN LRLYRKHVAA VTQSDQLFRG TIRDNITNFA PAPRLGAMHE AARLACIDRD
IDVLDNRYDT PLGDTQKFLS AGQMQRLLIA RALYCEPRLL ILDEFSSNLD QATTHEICRN
VLMLPCTIVL VTHDASILSM VDRIYEMRDG RLADITPARQ PELEVQK
|
|---|
| |