| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1135 |
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| Symbol | |
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| ID | 3845609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 1322162 |
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| End bp | 1323604 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637838438 |
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| Product | outer membrane protein TolC, putative |
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| Protein accession | YP_439332 |
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| Protein GI | 83716479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.196284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGACGG AGATGTTTGA AACAGCGAAT TTGGGTGCCT CGTCTAAATT TCGGCATGCG
GGTTTTCACT TAACGACAAA ATCCTTTCGA CTCCGCATCA ATGTGGTTTA CGTTACCGTT
TGCGCGGCGC TTGCCGCACT CGGCACCGGT TCCGAATCGG CGCGCGCATT CTGTCTCGAC
GAGGCTTATC AGCACGCAAT CTCGAATGAT CCGAAATTCC TCCAGGCGCG GGCCGAATAC
GACGCCGCGC GGCAGAAATT TCCGCAGGCG CGCGCGCAGA TGCTGCCGCA GGTGAGCGCG
CAGTTCGAAT GGGGCCGCTA CGGCACGCAC GCGAACCTGT TCGGCATCGA CGTGAGCGGC
AACAGCACCG CCGCGTACGG CGCCGCGCAA CTCTCGCAGG CGCTATTCAA CATGCCGTAC
CTGTATGACA TGAGCCGCGC GAAGGAATTC GAGGAATCCG CGCGGCAGCA GCTCGAAGTC
GCGAAGCAGG AGCTGATCAT GCGCGTCGCG AACGCATGCT TCGACCTGCT GTCCGCGCGC
GAGAAACTCC AGCTCGCCGA CGACGAGGTG GACGCGCTCA CGCGCCTCGA AAGCGACACG
CGCCGCATGG CGCAACTCGG CATGAAGACG ATCGGCGACA CGGCCGAGAT CGAGGCGCGC
AGAAGCCTCG CTCAATCGGA CGAGGCGCTC GCGCGCACCG ACGTCGAGGC GCGGCGCGCC
CGCTACGAAA CGCTGCTCGG CTCCGCGATC GACTTCACGC GCTGGCCGCG GCTCGCGATG
CACGGCACGT CGCCGCGCAT TCCGGCGGGC GACTACCAGC CGCAGGACAA CCCGTCGTAT
CAGCAGGCAT ATCGCGACCT GCGCGTCGCG CGGCTCGCGT CGAAACGGAT CAACGCGGAG
CACCTGCCGA CCGTCGACCT GTTCGCGACG TATTCGCGCG GCCTCAATCC GAACCTGCGC
GGCCTGACCG ACAAGAACGA CTTCCACCAG AGCGCGGTCG GCGTGCAGGT GACGATCCCG
ATCTTCTCGG GCGGCAGCGT GCATTACCGG AAGATCGAGG CCGACCACGT CGCGACGCAG
TATCAGAACC GGCTGCGCGA GGTCGAGCAG CAACTGAGCA CCGACCATCG CGAGATGCTC
GCGGCGCTGC AGTCGATCGG CACGCGCATC CGCGCGCTGC AGCAGTCGCT GCAGGCGGCG
CGGCTCGCGT ACGACTCGTC GATGAAGGCG CATCAGGTGG GCTACAGCAC GACGTACGAG
ACGCTGAACC TGCGCACCGA CATCTCGAAC ATCCGCCAGA AGCTGTTCGA GAGCTACCTC
GACGCGCTGA AGCTGCAACT GAAGCTCAAG GGCATTCTCG GCACGCTCGA CGAGCAGTCG
CTCGTCGCGG TCGACAGCTT CCTCGCGAGC AATGCGGCCC CGGCGGATCG CAGGAGCGAA
TGA
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| Protein sequence | METEMFETAN LGASSKFRHA GFHLTTKSFR LRINVVYVTV CAALAALGTG SESARAFCLD
EAYQHAISND PKFLQARAEY DAARQKFPQA RAQMLPQVSA QFEWGRYGTH ANLFGIDVSG
NSTAAYGAAQ LSQALFNMPY LYDMSRAKEF EESARQQLEV AKQELIMRVA NACFDLLSAR
EKLQLADDEV DALTRLESDT RRMAQLGMKT IGDTAEIEAR RSLAQSDEAL ARTDVEARRA
RYETLLGSAI DFTRWPRLAM HGTSPRIPAG DYQPQDNPSY QQAYRDLRVA RLASKRINAE
HLPTVDLFAT YSRGLNPNLR GLTDKNDFHQ SAVGVQVTIP IFSGGSVHYR KIEADHVATQ
YQNRLREVEQ QLSTDHREML AALQSIGTRI RALQQSLQAA RLAYDSSMKA HQVGYSTTYE
TLNLRTDISN IRQKLFESYL DALKLQLKLK GILGTLDEQS LVAVDSFLAS NAAPADRRSE
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