| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1072 |
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| Symbol | betA |
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| ID | 3846715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 1247285 |
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| End bp | 1248982 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637838375 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_439269 |
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| Protein GI | 83717344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00240234 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC GCGAATTCGA CTACATCATC TGCGGCGCGG GCTCCGCGGG CAACGTGCTC
GCGACGCGCC TCACCGAGGA CCCGGACGTC ACCGTGCTGC TCCTCGAGGC GGGCGGCCCC
GACTACCGGT TCGACTTCCG CACGCAGATG CCGGCGGCGC TCGCGTACCC GCTGCAGGGC
CGCCGCTACA ACTGGGCATA CGAAACCGAT CCCGAGCCGC ACATGAACAA CCGCCGGATG
GAGTGCGGGC GCGGCAAGGG GCTCGGCGGC TCGTCGCTGA TCAACGGGAT GTGCTATATC
CGCGGCAACG CGCTCGATTA CGACAACTGG TCGACGCACA AGGGCCTCGA GGACTGGACG
TATCTCGACT GCCTGCCGTA CTTCAGGAAG GCCGAGACGC GCGACGTCGG CCCGAACGAT
TATCACGGCG GCGACGGCCC GGTCTCGGTG ACGACGAGCA AGCCCGGCGT GAATCCGCTG
TTCGAGGCGA TGGTCGAGGC CGGCGTGCAG GCCGGCTATC CGCGCACCGA CGACCTCAAC
GGCTACCAGC AGGAAGGCTT CGGCCCGATG GACCGCACGG TCACGCCGCG CGGCCGCCGC
GCCTCGACCG CGCGCGGCTA TCTCGACCAG GCGCGGGCGC GGCCGAATCT CGAAATCGTC
ACGCACGCGC TCGCCGATCG CATCCTGTTC TCCGGCAAGC GCGCGACGGG CGTCACGTTC
CTGCACGGCA GCGCGCGCGT CACCGCGCAC GCGCGCCGCG AGGTGCTCGT GTGCAGCGGC
GCGATCGCCT CGCCGCAACT GCTGCAGCGC TCGGGCGTCG GCCCCGGCGA ATGGCTGCGC
GAGCTCGACA TTCCCGTCGT GCTCGATCTG CCCGGCGTCG GCCGCAATCT GCAGGACCAC
CTGGAGATGT ACATCCAGTT CGAGTGCAAG GAGCCGGTAT CGCTGTATCC GGCGCTCAAG
TGGTGGAACC AGCCGAAGAT CGGTCTCGAT TGGATGATCA ACGGCACAGG CCTCGGCGCG
AGCAACCACT TCGAAGCGGG CGGTTTCATC CGCACGCGCG ACGACGATCT GTGGCCGAAC
ATCCAATATC ACTTCCTGCC CGTCGCGATC AACTACAACG GCTCGAATGC GATCGAGATG
CACGGCTTCC AGGCGCACGT CGGCTCGATG CGCTCGCCGA GCCGCGGCCG CGTGAAGCTG
AAATCGCGCG ATCCGAACGC GCATCCGAGC ATCCTGTTCA ACTACATGGC CGAAGCGCTC
GACTGGCGCG AATTCCGCGA CGCGATTCGC GCGACGCGCG AGATCATGCA CCAGCCGGCG
CTCGACCGCT TCCGCGGCCG CGAGCTGAAC CCGGGCGCGG ACCTGAAGAG CGACAACGAG
CTCGACGCGT TCGTGCGCGC GCGCGCGGAA ACGGCGTTCC ATCCGTCGTG CTCGTGCAAG
ATGGGCTACG ACGACATGGC GGTCGTCGAC AATGAAGGCC GCGTGCACGG GATCGACGGA
TTGCGGGTTG TCGATGCGTC GATCATGCCG ATCATCACGA CCGGCAATCT GAACGCGCCG
ACGATCATGA TCGCCGAGAA GATCGCCGAC AAGATCCGCA AGCGAAAGCC GCTCGAACGG
TCGAACGCGC GATATTACGT CGCGAACGGC GCGCCCGCGC GCGGCGGCAA GCCTGCCCGA
GCGCCCGCCG CCGTGTAA
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| Protein sequence | MTTREFDYII CGAGSAGNVL ATRLTEDPDV TVLLLEAGGP DYRFDFRTQM PAALAYPLQG
RRYNWAYETD PEPHMNNRRM ECGRGKGLGG SSLINGMCYI RGNALDYDNW STHKGLEDWT
YLDCLPYFRK AETRDVGPND YHGGDGPVSV TTSKPGVNPL FEAMVEAGVQ AGYPRTDDLN
GYQQEGFGPM DRTVTPRGRR ASTARGYLDQ ARARPNLEIV THALADRILF SGKRATGVTF
LHGSARVTAH ARREVLVCSG AIASPQLLQR SGVGPGEWLR ELDIPVVLDL PGVGRNLQDH
LEMYIQFECK EPVSLYPALK WWNQPKIGLD WMINGTGLGA SNHFEAGGFI RTRDDDLWPN
IQYHFLPVAI NYNGSNAIEM HGFQAHVGSM RSPSRGRVKL KSRDPNAHPS ILFNYMAEAL
DWREFRDAIR ATREIMHQPA LDRFRGRELN PGADLKSDNE LDAFVRARAE TAFHPSCSCK
MGYDDMAVVD NEGRVHGIDG LRVVDASIMP IITTGNLNAP TIMIAEKIAD KIRKRKPLER
SNARYYVANG APARGGKPAR APAAV
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