Gene BTH_II1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1007 
Symbol 
ID3846577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1192310 
End bp1194748 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content68% 
IMG OID637838310 
Productsensory box histidine kinase 
Protein accessionYP_439204 
Protein GI83717440 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.572876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCCAT GGTGTCCGTC GCCTAATCTC CAGACATCAT TTGTCCATTG CGCCCGCGCG 
CGCCCGGAGC GCCGGTCGTG CCGTCAGCGC TTTCGTCCGG GGCGCAACGG CCGGCGTCGG
CGAGCGCCTG GAGCGGAAGG CGCCGCGTCC GTCGCCCGAG GGGCGCGCTT CGCGCGGCGC
GGGAGCGGTC CGGAATGCGT GGCGGCGCGC TGCGGGCTCG TCAGGCGGCC GCCTCCCGCG
ATCGAGCTTG CGAACGGCTT TCTGGCAAAG ACACCTGGGG GAGTCGAGAT GGCCTCGGGC
ATCAGGCGGT TGGGGAAAAC AGCGTCGCGC TGGATCGACT TCGGCTTGTG GACCGCCGCC
GCGCTGCTGC TGCTGACGGC GGGCGTCGGC GCGCTCGGCA CGGCCCGTCT GTTCGACAGC
GAGGCGGACG TCCATCGCGC GAGCGAAGTG ATATCGGGTC TCGAACGGCT GCTGTCGTTG
GCCCGAGACA TGGAGACGGG GCAGCGCGGA TACATCCTGA CCGGCAAGCC GGATTATCTT
CAGCCTTACG AAGCGGCATT GCCCGAAATC CGCAAGGAGT TCGATGCCCT CGCGCCGCTC
GTTCAGGACG ACCCCGTCCA GCAGCGGCGT CTCGCGGCGC TGCGCACGCT GCTCAAGAGA
AAGCAGGACG AACTCGCGGC GACGATCGCG CTTCGCAAGT CCGAGGGATT CGACGCGGCG
CAGGCGATCG TCTCGAGCGA TGCGGGCAAG ATCTTCATGG ACCGCGCGCG GACGATGGTC
AACGATATGG AGGCGACCGT CCAGCAGCAA CTGAGGGCGC TGCGCGATCG CGCGAGGGCG
ACGCGCGACG TCGCCATCGC CGTGGGGCTC GCGTCCGGGC TGCTGACGCT CGTCGTGTGC
GTGTCGTTCG GCTATGTGAT GCGCCGCCTG CTGCTCGTCG AGTCGGCCGC GAGCGACGAT
CTGTTCGCGC AGCGGGAACT GCTTCACGTG ACGCTCGCGA GCATCGGCGA CGGCGTGATC
GCGACGGACG TCGACGGCCG CATCACGTTC TTCAACCGGG TTGCCGAGGA GATGACCGCG
CTTGCCGCCG ATGCCGTCGT GGGCCAGCCG ATCGAGCAGG TGCTGACGTT TCGGCACGCG
TTGACGCAAC GCGTGATCGA CAATCCGGCG CGCGTCGCGG TGGAGCGCAA ACGCATCGCG
GCCTTGCCCG TGCATACGCG CTTCGTCGGG CGCGGCGGCG GGGAGTTGCC GGTGGACGGC
AATGCCGCGC CGACTTTCGA CGCGAACGGC AAGCTCGTCG GCGCGGTGCT CGTCGTGCGC
GACGTGTCGG AGCGCGAGCG GGCCGAGGAG CGATTCCGGC TCGCCGTCGA GGCCGCTCCG
AACGCGATGA TCATGGTGAA CCGCGAAGGC AAGATCGTGC TCGTCAACTC GCAAGCGGAG
AAATTCTTCG ACTACGTGCG CGGCGACATG ATCGGACAGG GCATCGACAT GCTGGTGCCC
GAGCGCTTTC GCGCCGGTCA CGCGACGCAC CGCGGCGCGT TCTTCGGCAA GCCGGATGCG
CGACCGATGG GCGCGGGGCG CGATCTGTTC GGCCTGCGCC GCGATGGCTC CGAATTCCCG
GTCGAAATCG GCCTCAATCC GATCACGACT TCGGAGGGCG CGTTCGTGCT GTGCTCGATC
ACCGACATCA CCGCGCGCAA GCGCGCGGAA CACGAGCTGC GCCGCAGGAG CGAGGAGCTC
GCGCGCTCGA ATCAGGATCT CGAACAGTTC GCATACGTCG CGTCTCACGA TCTGCAGGAG
CCGTTGCGCG CGGTCGCGGG GCCGCTGCAG CTGCTGCAGC GGCGATACCA GGGGCAACTC
GACGCGCGGG CCGACGAGTT CATCGGACAC GCGGTCGACG GCGCGACGAG GATGCAATCG
CTGATCGACG ACCTGCTGAG CTACTCACGC GTCGGGCGTC TCGAGGATGC GCGCCAGCCG
GTCGATTGCG AGCGCGTGCT CGACGAGGCG CTGCGCAACC TGAGCGCGGC GATTCGCGAA
TCCGGCGCGC AGATCACGCA TGACCGGCTG CCGATCGTGC ACGGCATCGC GGCCCAGCTC
GTGCTGCTGT TTCAGAACCT GATCGGCAAC GCGATCAAGT TCCGCAGCAA GGAGCGCATC
GCGCGGATTC ATCTGGAAGC GGACACGCGC GACGACGCAT GGGTGTTCCG GGTTCGCGAC
AACGGCATCG GGATCGATCC GCAGTACTTC GAGCGCATCT TCCTGATCTT CCAGCGCCTG
CATACGCGGC GCGAATATCC GGGAACGGGG CTCGGGCTCG CGCTCTGCAA GCGGATCGTC
GAGCATCATG GCGGCCGCAT CGCCGTCGAA TCCGAGCCGG GGCGGGGCAC GACGTTCTCG
TTTGCGCTGT CCCGGCCGGG CGCCGAGGAA ACGCGTTGA
 
Protein sequence
MRPWCPSPNL QTSFVHCARA RPERRSCRQR FRPGRNGRRR RAPGAEGAAS VARGARFARR 
GSGPECVAAR CGLVRRPPPA IELANGFLAK TPGGVEMASG IRRLGKTASR WIDFGLWTAA
ALLLLTAGVG ALGTARLFDS EADVHRASEV ISGLERLLSL ARDMETGQRG YILTGKPDYL
QPYEAALPEI RKEFDALAPL VQDDPVQQRR LAALRTLLKR KQDELAATIA LRKSEGFDAA
QAIVSSDAGK IFMDRARTMV NDMEATVQQQ LRALRDRARA TRDVAIAVGL ASGLLTLVVC
VSFGYVMRRL LLVESAASDD LFAQRELLHV TLASIGDGVI ATDVDGRITF FNRVAEEMTA
LAADAVVGQP IEQVLTFRHA LTQRVIDNPA RVAVERKRIA ALPVHTRFVG RGGGELPVDG
NAAPTFDANG KLVGAVLVVR DVSERERAEE RFRLAVEAAP NAMIMVNREG KIVLVNSQAE
KFFDYVRGDM IGQGIDMLVP ERFRAGHATH RGAFFGKPDA RPMGAGRDLF GLRRDGSEFP
VEIGLNPITT SEGAFVLCSI TDITARKRAE HELRRRSEEL ARSNQDLEQF AYVASHDLQE
PLRAVAGPLQ LLQRRYQGQL DARADEFIGH AVDGATRMQS LIDDLLSYSR VGRLEDARQP
VDCERVLDEA LRNLSAAIRE SGAQITHDRL PIVHGIAAQL VLLFQNLIGN AIKFRSKERI
ARIHLEADTR DDAWVFRVRD NGIGIDPQYF ERIFLIFQRL HTRREYPGTG LGLALCKRIV
EHHGGRIAVE SEPGRGTTFS FALSRPGAEE TR