Gene BTH_II0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0984 
Symbol 
ID3844714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1171650 
End bp1173545 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content67% 
IMG OID637838287 
ProductTRAP transporter DctM family protein 
Protein accessionYP_439181 
Protein GI83717806 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID[TIGR00786] TRAP transporter, DctM subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTT TCTCCGTGAC GCCCGGACCA CAGGCGCAAC GCGCCGCACC GGGCGTCGGC 
CATGACACCG TGCTCGCACG CGGCCTCGCG CGCCTCGTGC ACTGGATCGA GTACCTGTGC
GCGGCCGTGC TCGCAGCCGA CGTGCTCGTG GTGTTCCTCT CCGTGATCTA CCGCTATTTC
CTGCACGATC CATTCGACTG GGCCGAGGAA GTCGCCGCGG CGCTGATGAT CGTACTGGTG
TTCCTCGGCG CCGCCACGGT GCTTGCGCGC AGCCAGCACG TCGGCATCGA CCTGTTTCGC
GGCATGTTTC CCAAGCGCTG GCAGCCGGCG CTCGTTCACG CGGGACACTG GGTGATCGCG
GGCGTCGCGG GGAATCTGTG CGTGTCGTCG TGCCTGCTGC TGGCCGACTC CTACGGCCAG
ATGACGCCGA GCGGCCTCCC GGCGTGGATC AACGTGTATC CGCTCGTCAT CGGCAGCGTG
TTCATGACGG TGTTCGCGCT CGCCAACGCG CTCAACGGCG CGCGCAAGAC CGTGCTCGGC
ACCTTGATCG GCTGCGTTCT GCTCGCGGCG GCCGTGTTCG CGTGGAACGC GTTCGTGCCC
GGTCACGCGC TCAAGCCCGG CTTCCTGCTG ATGGCCGGAT TCATCGGCGG GCTCGTGCTC
GGCGTGCCGA TCGGCTTCGT GCTCGCGTTC TCGGCGCTGC TGTACTTCCT CGCGGAACCG
TCCCTGCCGA TGCTCGTCTA CTCGCAGCAG GTGATGGCCG GCACCGACCA CTTCGTGCTG
CTCGCGATTC CGTTCTTCGT GCTGGCCGGA CTGCTGATGG AAACCAACGG CATGTCGTCG
CGCCTGATCG AGCTGCTGCT GCGGATTTTC GGGCGCGTGC GCGGCGGCCT CGGCCTTATC
ACAATCATGG CGACGGCGTT CTTCTCCGGC GTGTCCGGTT CAAAGCTCGC GGATATCGCG
GCGGTCGGCG GGGTCGTGAT GCCGGCCGTG CGCCTGAGCC GGGAAGACCC GAACGAAGCC
GCGGCGTTGC TCGCCTGCAG CGCCGTGATG GCGGAAACCA TTCCGCCGTG CGTGAACATG
ATCATCATGG GCTTCGTCGC GAACATTTCG ATCGCGGGGC TGTTCCTCGC GGGCGTCGTG
CCGGCCGCCG TCCTCGCCGC GACGCTCGCA GCCGTCGCGG TGATTTGCGG GCGCCGCATC
AATCTCGCCG ATGCGCTCCC CCATCCGCGC GCGTGGATGC CGCTGCTCGG CGGCGCGCTC
GTCGCGCTCG TCATGATCAC CATGATCGGC AAGGGCGTGA CGTCGGGCAT CGCGACGTCG
ACGGAAGTGT CCGCGTTCGC CGTGGTCTAT GCGCTCATCG TCGGCGGGCT GGCGTTTCGC
GAACTCACGC CGAAATCGGT CGTGCGCGTG TTCGTGCGCT CGGCATCGAT GGCGAGCAGC
ATTCTGTTCA TCGTCGCCGC GGCCTCCAGC GTGTCGTTCG CGTTGACCAT CGAGCAGATT
CCCGCGCTCG TTTCCGATTC GATGATCGTC TTCGCGCATC AGTACGGGCC GACGACGTTC
CTGCTGCTGT CCGTGCTCAT CATGATCGTG TTCGGCGCGG TGCTGGAAGG CGCGCCCGCG
CTCATCATCT TCGGGCCGCT CCTCACCCCG ATCGCCGCGC AGCTCGGCAT CAACCCGCTG
CATTTCGGCA CGGTGATCGT CGTCGCGATG GGGCTCGGCC TGTTCGCGCC GCCGATCGGC
CTGGGCCTGT TCGCGACCTG CGCCATCACC GGCACGGAAA TGAAGGCCGT GGCGCGTCCT
ATGCTCAAAT ACCTGCTGGT GCTGTGCACC GCACTGGTGG CGCTGATTCT GGTGCCGTCC
TTTTCGTTGT GGTTGCCGAC CCGGCTCGGC CTGTAG
 
Protein sequence
MTTFSVTPGP QAQRAAPGVG HDTVLARGLA RLVHWIEYLC AAVLAADVLV VFLSVIYRYF 
LHDPFDWAEE VAAALMIVLV FLGAATVLAR SQHVGIDLFR GMFPKRWQPA LVHAGHWVIA
GVAGNLCVSS CLLLADSYGQ MTPSGLPAWI NVYPLVIGSV FMTVFALANA LNGARKTVLG
TLIGCVLLAA AVFAWNAFVP GHALKPGFLL MAGFIGGLVL GVPIGFVLAF SALLYFLAEP
SLPMLVYSQQ VMAGTDHFVL LAIPFFVLAG LLMETNGMSS RLIELLLRIF GRVRGGLGLI
TIMATAFFSG VSGSKLADIA AVGGVVMPAV RLSREDPNEA AALLACSAVM AETIPPCVNM
IIMGFVANIS IAGLFLAGVV PAAVLAATLA AVAVICGRRI NLADALPHPR AWMPLLGGAL
VALVMITMIG KGVTSGIATS TEVSAFAVVY ALIVGGLAFR ELTPKSVVRV FVRSASMASS
ILFIVAAASS VSFALTIEQI PALVSDSMIV FAHQYGPTTF LLLSVLIMIV FGAVLEGAPA
LIIFGPLLTP IAAQLGINPL HFGTVIVVAM GLGLFAPPIG LGLFATCAIT GTEMKAVARP
MLKYLLVLCT ALVALILVPS FSLWLPTRLG L