Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0984 |
Symbol | |
ID | 3844714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1171650 |
End bp | 1173545 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637838287 |
Product | TRAP transporter DctM family protein |
Protein accession | YP_439181 |
Protein GI | 83717806 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTT TCTCCGTGAC GCCCGGACCA CAGGCGCAAC GCGCCGCACC GGGCGTCGGC CATGACACCG TGCTCGCACG CGGCCTCGCG CGCCTCGTGC ACTGGATCGA GTACCTGTGC GCGGCCGTGC TCGCAGCCGA CGTGCTCGTG GTGTTCCTCT CCGTGATCTA CCGCTATTTC CTGCACGATC CATTCGACTG GGCCGAGGAA GTCGCCGCGG CGCTGATGAT CGTACTGGTG TTCCTCGGCG CCGCCACGGT GCTTGCGCGC AGCCAGCACG TCGGCATCGA CCTGTTTCGC GGCATGTTTC CCAAGCGCTG GCAGCCGGCG CTCGTTCACG CGGGACACTG GGTGATCGCG GGCGTCGCGG GGAATCTGTG CGTGTCGTCG TGCCTGCTGC TGGCCGACTC CTACGGCCAG ATGACGCCGA GCGGCCTCCC GGCGTGGATC AACGTGTATC CGCTCGTCAT CGGCAGCGTG TTCATGACGG TGTTCGCGCT CGCCAACGCG CTCAACGGCG CGCGCAAGAC CGTGCTCGGC ACCTTGATCG GCTGCGTTCT GCTCGCGGCG GCCGTGTTCG CGTGGAACGC GTTCGTGCCC GGTCACGCGC TCAAGCCCGG CTTCCTGCTG ATGGCCGGAT TCATCGGCGG GCTCGTGCTC GGCGTGCCGA TCGGCTTCGT GCTCGCGTTC TCGGCGCTGC TGTACTTCCT CGCGGAACCG TCCCTGCCGA TGCTCGTCTA CTCGCAGCAG GTGATGGCCG GCACCGACCA CTTCGTGCTG CTCGCGATTC CGTTCTTCGT GCTGGCCGGA CTGCTGATGG AAACCAACGG CATGTCGTCG CGCCTGATCG AGCTGCTGCT GCGGATTTTC GGGCGCGTGC GCGGCGGCCT CGGCCTTATC ACAATCATGG CGACGGCGTT CTTCTCCGGC GTGTCCGGTT CAAAGCTCGC GGATATCGCG GCGGTCGGCG GGGTCGTGAT GCCGGCCGTG CGCCTGAGCC GGGAAGACCC GAACGAAGCC GCGGCGTTGC TCGCCTGCAG CGCCGTGATG GCGGAAACCA TTCCGCCGTG CGTGAACATG ATCATCATGG GCTTCGTCGC GAACATTTCG ATCGCGGGGC TGTTCCTCGC GGGCGTCGTG CCGGCCGCCG TCCTCGCCGC GACGCTCGCA GCCGTCGCGG TGATTTGCGG GCGCCGCATC AATCTCGCCG ATGCGCTCCC CCATCCGCGC GCGTGGATGC CGCTGCTCGG CGGCGCGCTC GTCGCGCTCG TCATGATCAC CATGATCGGC AAGGGCGTGA CGTCGGGCAT CGCGACGTCG ACGGAAGTGT CCGCGTTCGC CGTGGTCTAT GCGCTCATCG TCGGCGGGCT GGCGTTTCGC GAACTCACGC CGAAATCGGT CGTGCGCGTG TTCGTGCGCT CGGCATCGAT GGCGAGCAGC ATTCTGTTCA TCGTCGCCGC GGCCTCCAGC GTGTCGTTCG CGTTGACCAT CGAGCAGATT CCCGCGCTCG TTTCCGATTC GATGATCGTC TTCGCGCATC AGTACGGGCC GACGACGTTC CTGCTGCTGT CCGTGCTCAT CATGATCGTG TTCGGCGCGG TGCTGGAAGG CGCGCCCGCG CTCATCATCT TCGGGCCGCT CCTCACCCCG ATCGCCGCGC AGCTCGGCAT CAACCCGCTG CATTTCGGCA CGGTGATCGT CGTCGCGATG GGGCTCGGCC TGTTCGCGCC GCCGATCGGC CTGGGCCTGT TCGCGACCTG CGCCATCACC GGCACGGAAA TGAAGGCCGT GGCGCGTCCT ATGCTCAAAT ACCTGCTGGT GCTGTGCACC GCACTGGTGG CGCTGATTCT GGTGCCGTCC TTTTCGTTGT GGTTGCCGAC CCGGCTCGGC CTGTAG
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Protein sequence | MTTFSVTPGP QAQRAAPGVG HDTVLARGLA RLVHWIEYLC AAVLAADVLV VFLSVIYRYF LHDPFDWAEE VAAALMIVLV FLGAATVLAR SQHVGIDLFR GMFPKRWQPA LVHAGHWVIA GVAGNLCVSS CLLLADSYGQ MTPSGLPAWI NVYPLVIGSV FMTVFALANA LNGARKTVLG TLIGCVLLAA AVFAWNAFVP GHALKPGFLL MAGFIGGLVL GVPIGFVLAF SALLYFLAEP SLPMLVYSQQ VMAGTDHFVL LAIPFFVLAG LLMETNGMSS RLIELLLRIF GRVRGGLGLI TIMATAFFSG VSGSKLADIA AVGGVVMPAV RLSREDPNEA AALLACSAVM AETIPPCVNM IIMGFVANIS IAGLFLAGVV PAAVLAATLA AVAVICGRRI NLADALPHPR AWMPLLGGAL VALVMITMIG KGVTSGIATS TEVSAFAVVY ALIVGGLAFR ELTPKSVVRV FVRSASMASS ILFIVAAASS VSFALTIEQI PALVSDSMIV FAHQYGPTTF LLLSVLIMIV FGAVLEGAPA LIIFGPLLTP IAAQLGINPL HFGTVIVVAM GLGLFAPPIG LGLFATCAIT GTEMKAVARP MLKYLLVLCT ALVALILVPS FSLWLPTRLG L
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