| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0941 |
|---|
| Symbol | |
|---|
| ID | 3845601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 1111076 |
|---|
| End bp | 1113577 |
|---|
| Gene Length | 2502 bp |
|---|
| Protein Length | 833 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637838244 |
|---|
| Product | glycogen phosphorylase family protein |
|---|
| Protein accession | YP_439138 |
|---|
| Protein GI | 83716471 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.893354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCAT TCCTGCCGCG TGCGTTGCCC GCGTCATTGT CGGCGTTGAC CGAGCTCGCG
CTCGATCTGC GCTGGACATG GAGCCATGCG CTCGACGCGC TCTGGCAGGC CATCGACCCC
GAGCTCTGGG GGCGGACCGG CAACCCGTGG ATCATTCTGC AGAACGTATC GCAACATCGG
CTCGACGAGC TGTGCGGCGA TCGCGATTTC TCGTCGAAGC TCGCCGCCGC GATCGACGAC
CATCGCCGCT ATCACGGCGA CCGCGGCTGG TGGCAGGCGC AAAGCGAAGG CGCCGCGGAC
GCGCCGGGCA CGATCGCATA CTTCAGCATG GAGTTCGGTC TCGGCGAAGC GTTCGCGCTG
TACGCGGGCG GACTCGGCGT GCTCGCTGGC GATTACCTGA AGACGGCGAG CGATCTGGGC
GTTCCGGTGA TCGGCGTCGG CCTGCTGTTT CAGGAAGGCT ATTTCCGTCA GAGCATCGAT
GCGAGCGGCC GGCAGCGCGA GGCCTATCCG TACAACGATC CGACGAGCCT GCCGATCCAG
CCCGTGATCG GCGCCGACGG CGCGTGGCTG AAGGTCGGGC TCGATCTGCC CGGCCGCACG
CTGTACTTGC GCGTATGGCT CGCGATCGTC GGCCGCACCC GTCTGTATCT GCTCGACAGC
AACGACCTGC GCAACAGCGT CGGCGATCGC GGCATCACCG CGAAACTGTA TGCGGGCGGC
GCCGAGACGC GCCTGCTGCA GGAAATGGTG CTCGGCGTCG GGGGATGCGC GATGCTGGAC
GCGCTCGGCC TCGAAGTGGA CGTGTGCCAC ATGAACGAGG GGCATGCGGC GCTCCTCGTG
CTCGAGCGCG CGCGCCTTTT CATGCAGAAG CACGGCACGT CCTTTCGCGA CGCGTGGTGG
GCGACGCGCG GCGGCAACGT GTTTACGACG CACACGCCGG TCATGGCGGG ATTCGACACA
TTCGCGCAGC CGCTCGTCCT CGAGTATCTG CGTGGGTACG AACGGGCATT CGACATTTCG
TCGCGTGACC TGCTGGCGCT CGGTCGCGCC GATCCGCTGA ACGACGACGA GCCGTTCGGC
ATGGCGTACC TCGCGTTGCG CGGCTCCGCT CAGGCGAACG GCGTGAGCCT GCTGCACGGC
GAGGTCAGCC GCCGGAAGTT CAGCAGCCTC TATCCGCGCT GGCCCGTCGA CGAGGTGCCG
GTCAGCCACG TGACGAACGG CGTGCACGTG CCGAGCTGGG ATTCGGCATG GGCGGACGAC
CTGTGGACGT GCGCTTGCGG CAAGGGGCGC TGGCTCGGTT CGGTGGACGG CCACACCGCG
GCCGTCGCGG CTTGCGACGA CGAGCAGTTA TGGGCGCTCG CGGCGCAGCA GCGCCGCGAT
CTCGTGCGCT ATGCGCGACG GCGGCTCGGC TGGCAGCTCG CGCAGCGCGG CGAGCCGCAG
CGGCAGGTCG TGCAGGCGGC GCAGGTGCTC GATCCGAACA TCCTCACGCT GGGCTTCGCG
CACCGCTTCA CCGATTACAA GCGGCCGAAC CTGCTGCTGC ACGACGCCGG GCGTCTTGCA
CGGCTGCTCA CGGACGAAAG GCAGCCGGTT CAACTGATCG TCGCCGGCAA GGCGCATCCC
GACGACGAGC GGGGCAAGCA GCTCATTCAT GCGTGGGTCG AGTTCAGCCA CCAGCCCGCG
CTGCGGCGGC GCGTCGTGTT TCTCGAGGAC TACGACATGG CGCTCGCGCA GCAGCTCGTG
CAGGGCGTCG ACGTCTGGAT CAACACGCCG CGCAGGCCGT GGGAGGCGTG CGGAACGAGC
GGAATGAAGG TGCTCGCGAA CGGCGGCCTG AATCTGTCCG AGCTCGACGG CTGGTGGGCG
GAGGCGTATC GGCCTGCGTA CGGATGGGCG TTTGGATGCG GAGACGATGA TGCGGACGAC
GCGCAGGCCG TGTACCGGAT ACTCGAGAAC GATATCGTGC CGGCGTTCTA CCGGCGCGAC
GCTCGCGGCG TGCCGCGCGA ATGGGTGCAG CGGATGCGCG CGAGCATGTC CGAGCTCGCG
CCGCGTTTCA GCAGCAACCG GATGCTGACC GACTATCTCG TGCGCTTTTA TCGGCCGGCG
GCGGCCGCGT ATCGCAACCG CAGCCGCGAT CAAGCGAATC TCGCGAAGGC GCTGAACGCG
TGGGAAACGG CGCTCGATGC CGATTGGCAC GAGGTGCACT TCGGGCCGGT CGAGGTGCGG
CGCGAACAGG ACATGTGGCG CTTCACGCTG CCCGTCTACC TTGGCGAGAT CCTGCCGCAA
TGGGTGCGGG TGGAACTGTA CGCGGAGGCG GACGGCGCGC GCCCGGCCGA ATGCCGGCCG
ATGACGGCGA CCGGAACGAT TCCGGGCTCG ATCCAGGGAT ACCTCTTCGG CGCGAGCGTG
CCGGCGACGC GGTCGGCCGA CCATTACACG CCGCGCGTGC GGGCCTGGCA CGACGATGCG
TTCCTGCCGG CCGAGCTCAA CCTGATCGCC TGGCACCACT GA
|
|---|
| Protein sequence | MFAFLPRALP ASLSALTELA LDLRWTWSHA LDALWQAIDP ELWGRTGNPW IILQNVSQHR
LDELCGDRDF SSKLAAAIDD HRRYHGDRGW WQAQSEGAAD APGTIAYFSM EFGLGEAFAL
YAGGLGVLAG DYLKTASDLG VPVIGVGLLF QEGYFRQSID ASGRQREAYP YNDPTSLPIQ
PVIGADGAWL KVGLDLPGRT LYLRVWLAIV GRTRLYLLDS NDLRNSVGDR GITAKLYAGG
AETRLLQEMV LGVGGCAMLD ALGLEVDVCH MNEGHAALLV LERARLFMQK HGTSFRDAWW
ATRGGNVFTT HTPVMAGFDT FAQPLVLEYL RGYERAFDIS SRDLLALGRA DPLNDDEPFG
MAYLALRGSA QANGVSLLHG EVSRRKFSSL YPRWPVDEVP VSHVTNGVHV PSWDSAWADD
LWTCACGKGR WLGSVDGHTA AVAACDDEQL WALAAQQRRD LVRYARRRLG WQLAQRGEPQ
RQVVQAAQVL DPNILTLGFA HRFTDYKRPN LLLHDAGRLA RLLTDERQPV QLIVAGKAHP
DDERGKQLIH AWVEFSHQPA LRRRVVFLED YDMALAQQLV QGVDVWINTP RRPWEACGTS
GMKVLANGGL NLSELDGWWA EAYRPAYGWA FGCGDDDADD AQAVYRILEN DIVPAFYRRD
ARGVPREWVQ RMRASMSELA PRFSSNRMLT DYLVRFYRPA AAAYRNRSRD QANLAKALNA
WETALDADWH EVHFGPVEVR REQDMWRFTL PVYLGEILPQ WVRVELYAEA DGARPAECRP
MTATGTIPGS IQGYLFGASV PATRSADHYT PRVRAWHDDA FLPAELNLIA WHH
|
|---|
| |