Gene BTH_II0848 details

Gene Information

• Locus tag: BTH_II0848
• ID: 3845590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: -
• Start bp: 989822
• End bp: 990607
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637838151
• Product: type III secretion target BopE
• Protein accession: YP_439045
• Protein GI: 83718310

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.309877
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTACA ACCCGAGAAT CGGCGGATTC ACGCACGTCA AGCAGGCGTC GTTCGACGTT 
CACGTCAAGC GCAGCGAAGC GCGGCCGCGC ACGTCGTTCG CACAACAGAT CAAGCGCATC 
TTCAGCAAGA TCGGCGAAAC GCTCGGGCAA CTGTTCCGCC ACCGCGCGCC GGACGGCGCG 
CCCGGCCGGG TCAAACTGCA GGGCGTGCGC TACGTCGGCA GCTATCGGCC CACGGGCGAC 
GCGAGGCAGG CGATCCGGCA TTTCGTCGAC GAGGCGGTCA AGCAGGTCGC CCACGCGCGT 
ACCCCGGAGA TCCGGCAGGA TGCGGAATTC GGCCGGCAAG TCTACGAAGC GACGCTCTGC 
GCGATCTTCA GCGAAGCGAA GGACCGGTTC TGCATGGACC CGGCCACGCG CGCGGGCAAC 
GTGCGGCCGG CGTTCATCGC GGCGCTCGGC GACGCGGCGC GCGCCACCGG GCTGCCCGGC 
GCCGACAAGC AAGGCGTGTT CACGCCGAGC GGCGCCGGCA CGAATCCGCT CTACACCGAG 
ATCCGGCTGC GCGCCGATAC GCTGATGGGC GCCGAGCTGG CCGCCCGCCC AGAGTATCGC 
GAGCTTCAGT CGTATGCGCG GCAGCAGGCG ATCGACCTCG TCGCGAACGC GTTGCCGGGC 
GAGCGTTCGA ACACGCTCGC CGAGTTCCGG CAGACGGTGC AGACGCTCGA AGCCACGTAC 
CGCCGCGCGG CGCAAGACGC ATCGCGCGAC GAGAAGGGCG CGGCGAACGC GGCGGACGGC 
GCATGA 

 

Protein sequence

MTYNPRIGGF THVKQASFDV HVKRSEARPR TSFAQQIKRI FSKIGETLGQ LFRHRAPDGA 
PGRVKLQGVR YVGSYRPTGD ARQAIRHFVD EAVKQVAHAR TPEIRQDAEF GRQVYEATLC 
AIFSEAKDRF CMDPATRAGN VRPAFIAALG DAARATGLPG ADKQGVFTPS GAGTNPLYTE 
IRLRADTLMG AELAARPEYR ELQSYARQQA IDLVANALPG ERSNTLAEFR QTVQTLEATY 
RRAAQDASRD EKGAANAADG A