| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0836 |
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| Symbol | spaP |
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| ID | 3846397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 977675 |
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| End bp | 978367 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637838139 |
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| Product | surface presentation of antigens protein SpaP |
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| Protein accession | YP_439033 |
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| Protein GI | 83718329 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.108898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAATA ACGAAATCGC GCTGATCGTC CTGCTGACGG CGGCGACGCT CGTGCCGTTC
GTCGTCGCGG CGGGCTCGTG CTTCATCAAG TTCTCGATCG TGCTCGTGCT CGTGCGCAAC
GCGCTCGGCA TCCAGCAGGT GCCGTCGAAT CTCGCGCTCA ACAGCATCGC GCTCATCATG
TCGCTGTTCG TGATGATGCC CGTCGCGCAG AGTGCGTACC GGTATCTGCA GCACCATCCG
CTCGACGTGA TGAACGGCAG TTCGGTCAAC GATTTCATCG ACGGCGGCCT CGGCGATTAC
AAGCGCTATC TGACGCGTTA CTCCGATCCG GAGCTCGTGC GCTTCTTCGA GCGCGCGCAA
GCCGCGCGCC TGAAGCGCGA CGACGCCGAC GCGGCCGACG CCGACGCGGA CGCCGGCGAC
GAGCCGGACG GCCTCGACAA CTCGCTGTTC TCGCTGCTGC CCGCGTACGC GCTCACCGAG
ATCAAGAGCG CGTTCAAGAT CGGCTTCTAC CTGTATCTGC CGTTTCTCGT CGTCGACATG
GTGGTGTCGA GCGTGCTGCT CGCGCTCGGG ATGATGATGA TGAGCCCGGT GACGATCTCG
GTGCCGATCA AGCTGATCCT GTTCGTCGCG ATGGACGGCT GGACGCTGAT CTGCAAGGGC
TTGATCGAGC AGTACCTGAA TCTGATGAAA TAG
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| Protein sequence | MANNEIALIV LLTAATLVPF VVAAGSCFIK FSIVLVLVRN ALGIQQVPSN LALNSIALIM
SLFVMMPVAQ SAYRYLQHHP LDVMNGSSVN DFIDGGLGDY KRYLTRYSDP ELVRFFERAQ
AARLKRDDAD AADADADAGD EPDGLDNSLF SLLPAYALTE IKSAFKIGFY LYLPFLVVDM
VVSSVLLALG MMMMSPVTIS VPIKLILFVA MDGWTLICKG LIEQYLNLMK
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