| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0830 |
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| Symbol | |
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| ID | 3844968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 971242 |
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| End bp | 973350 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637838133 |
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| Product | type III secretion system protein BsaQ |
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| Protein accession | YP_439027 |
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| Protein GI | 83717923 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00148926 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGCG CTCCTCATTC GAACCGGTCG ATAGACATGC TGAAGAATCT CCTGATCAAG
GCACAAGCGC GCCCCGAACT GATCGTCCTG TGCCTGATGG TGCTCGTGAT CGCGATGCTG
ATCGTGCCGC TGCCGCCGTA CGTGCTCGAT TTCCTGATCG GCCTGAACAT CGTGACGGCG
CTGCTCGTGT TCATGGGCTC GTTCTACATC GTCAACATCC TCGAATTCTC GACGTTTCCG
TCGATCCTGC TGATCACGAC GCTGTTTCGC CTCGCGCTGT CGATCAGCAC GAGCCGGATG
ATCCTGCTCA CGGCCGAGGG CGGCAAGATC ATCACGACGT TCGGGCAGTT CGTGATCGGC
GATAACCTCG TCGTCGGCTT CGTCGTGTTC GTGATCGTGA CGATCGTGCA GTTCATCGTG
ATCACGAAGG GCTCGGAGCG CGTCGCCGAG GTCGCGGCGC GCTTCTCGCT CGACGCGATG
CCCGGCAAGC AGATGAGCAT CGACGCGGAC CTGCGCGCCG GCATCATCGA CAACGAAGGC
GTGAAGGCCC GCCGCTCGGC GCTCGAGCGC GAGAGCCAGC TGTACGGCTC GTTCGACGGC
GCGATGAAGT TCATCAAGGG CGACGCGATC GCCGGCATCG TCGTCATCTT CGTGAACCTG
ATCGGCGGCG TCTCGGTCGG CGTGATGCAG CACGGCATGT CGGTGTCCGA CGCGCTCACG
ACCTACACGA TCCTGTCGAT CGGCGACGGC CTCGTCGCGC AGATCCCGGC GCTCTTGATC
GCGATCGGCG CGGGCTTCGT CGTCACCCGC GTGAGCGGCT CGGGCAACAA CCTCGGCGCG
AACATCGTCG GCGAGCTGTT CTCGAACCCG TTCGTGCTCG TCGTCACGGC CGTGCTCGCG
CTCGCGATCG GCCTGCTGCC CGGTTTTCCG CTCGCCGTCT TCCTGCTGAT CGCGCTCGCG
CTGGGCGCGC TGTACGTGCG CCGCGAATGG CGCAAGCCGG GCGAGCCGCC GCGCGAGGGC
GGGCTCGCCG GCAAGGTCGC GGGCGCGCTC TCGGGCGGCG GCGCGGCGAA ACCGGCCGAC
GCCGACGCCG GTGACGTCGA CATCGACAAG CTGATTCCGG AGACGGTGCC GCTGATGCTG
ATGGTGCCCG AGGCGGCGCA GCCGATGTTC GAGCGGGAAG GCGTGATCGC CGCGTTCAGG
CGGCGCGCGT TCGTCGACAT GGGGCTGCGG CTGCCGGACA TCCGCGTCGT GTATTCGCCG
CAGGTGCATC CGCGCGAGGC GATCGTGCTG ATCAACGAGA TCCGCGCGGC GACGTTCGCG
ATCTGCTTCG ACCGGCATCG CGTGATCGGC TCGACGCTTG CGCTCGAAGG GCTGCCCGTC
GACGTCGTGA CGCTGCCGGA CGGCGCGGGC GGCGACGCAT GGTGGGTGCC GGGCGCGCAG
ACCGACGCGC TGGCGAAGAT CGACGTGCTC ACGCGCTCGG CGATCGACGA CCTGTACGGA
CAGTTCCTCG CGGTGATGCT CGGCAACGTA TCGGAGTTCT TCGGCGTGCA GGAAGCCAAG
CGCCTGCTCG ACGACATGGA CCGCAAGTAT CCGGAACTCA TCAAGGAGAG CTATCGGCAC
ATTTCGGTGC AGCGCATCGC CGAGGTGTTC CAGCGCCTGC TCGCCGAGAA GATCTCGATC
CGCAACATGA AGCTGATTCT CGAATCGCTC GCGCAGTGGG GGCCGAAGGA GAAGGATTCG
ATCCTGCTCG TCGAGCACGT GCGCGCGGCG CTCGCGCGCT ACATCTCGAA CCGCTTCGCG
GCGGGCGGCA AGCTGCGCGC GCTCGTGCTG TCCGCCGAGT TCGAGGATGC GGTGGGCAAG
GGCGTGCGGC AGACCTCGGG CGGCGCGTAC CTGAACCTGG AGCCCGCGAC GAGCGAGCAA
CTGCTCGACC GGCTCGCGCT CGAGCTCGCG CACGCGGGCT TCTCGCAGCG CGACATGGTG
CTGCTCGCGT CGATGGAAGT CAGGCGTTTC GTCAAGCGGC TGATCGAGAG CCGCTTTCCG
GAACTGGAGG TGCTGTCGTT CGGCGAAGTG GCCGACAGCG TCGCAATCGA TGTGTTGAAG
ACGATCTAA
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| Protein sequence | MRGAPHSNRS IDMLKNLLIK AQARPELIVL CLMVLVIAML IVPLPPYVLD FLIGLNIVTA
LLVFMGSFYI VNILEFSTFP SILLITTLFR LALSISTSRM ILLTAEGGKI ITTFGQFVIG
DNLVVGFVVF VIVTIVQFIV ITKGSERVAE VAARFSLDAM PGKQMSIDAD LRAGIIDNEG
VKARRSALER ESQLYGSFDG AMKFIKGDAI AGIVVIFVNL IGGVSVGVMQ HGMSVSDALT
TYTILSIGDG LVAQIPALLI AIGAGFVVTR VSGSGNNLGA NIVGELFSNP FVLVVTAVLA
LAIGLLPGFP LAVFLLIALA LGALYVRREW RKPGEPPREG GLAGKVAGAL SGGGAAKPAD
ADAGDVDIDK LIPETVPLML MVPEAAQPMF EREGVIAAFR RRAFVDMGLR LPDIRVVYSP
QVHPREAIVL INEIRAATFA ICFDRHRVIG STLALEGLPV DVVTLPDGAG GDAWWVPGAQ
TDALAKIDVL TRSAIDDLYG QFLAVMLGNV SEFFGVQEAK RLLDDMDRKY PELIKESYRH
ISVQRIAEVF QRLLAEKISI RNMKLILESL AQWGPKEKDS ILLVEHVRAA LARYISNRFA
AGGKLRALVL SAEFEDAVGK GVRQTSGGAY LNLEPATSEQ LLDRLALELA HAGFSQRDMV
LLASMEVRRF VKRLIESRFP ELEVLSFGEV ADSVAIDVLK TI
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