| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0829 |
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| Symbol | |
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| ID | 3845967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 970016 |
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| End bp | 971242 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637838132 |
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| Product | type III secretion system protein BsaP |
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| Protein accession | YP_439026 |
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| Protein GI | 83716244 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02511] type III secretion effector delivery regulator, TyeA family
[TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00319367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAATCG GGAGGGCCGG CGGACAACGC GACGCTGCGC GCGACCGTGC AGATGCTCAA
ACCCTACATG GACGACCAGT CATGAGCTCG ATCATCGGCG GCGCGTCGGC CGCGCGGCGC
GGCTTTTCGA TCGACGGCAC GGGGAGCGCG GCGAACCGGC TCGACGCGGA GCCGTCGCTC
GACGACGCGC CGCAGACGGG CGCGGCGGGC GCGGCGGGCG CGGCGGGCGC GGCCGACGTG
CAGGCGCAAC TCGCCGGCGT CGACGAGGAG GCGGCGAACG CCGCCGCGCA ATTCGGCCGG
TTCCGCGCGT CGGAGCGCAA GGGGCGCCGC AGCGACGACC TCGAACGGAT TCTCGACACG
GACGCCGACG AGAAGCTCGA CGAGCTCGCC GCGCTGCTCG GCGGCCGCGC GCCGCGCGGC
CGCGTGGACC TCGCGACGCT GCTGCGCGAC GCGCGCGAGC GCTTTCGCGA CGAGAGCGAT
CTGCTGCTCG CGCTGCGCGA GTTGCGCCGG CGGCGCCGGC TCGACGGCGA ATCCGTCGAC
GTCGTCGAGC GCGCGATCGA CGAACTGCTC GCGGGCGACG GCAACAAGCG GATCAAGGCG
GGCATCAACG CGGCGCTCAA AGCGAAGGTG TTCGGCGCGC GGATGCAGCT CGATCCCCGC
CGGCTGCGCG AGCTGTACCG GCAGTTCCTC GAGTTCGACG GCTCGCATCT CGTCGTCTAC
GAAGACTGGA TCGAGCAGTT CGGCGCGAGC CGCCGCAAGC GGATTCTCGA CTACGTGAGC
GCCGCGCTGT CGTACGACAT GCAGTCGCAC GACCCGAGCT GCGGCTGCGC GGCCGAGTTC
GGGCCGCTCC TCGGCACGCT GCATCGCGCG CGGATGCTCG CGTCGGCCGA CGAGCAGTTC
GTCGGCCGGC TGCTCGACGA CGCGCTCGCG CGCGATTGCG GGCTCACCGA GGAGCGCGCG
CTCGCGACGA TGCTGGGCGG CCTGCAGCGG CCGTTCTCGG TCGCCGACGT GCTGCTGCGC
GCGCTCGGCG ATCTGCTCGA GCCGCTTTCG GCCGCTCGCC GCTCGCAACT GCTGCAACTC
GCGCTGCGCG CGTTCGCGGG CGTGCCGATC GCGCTCTACG GCGATGCCGA CGCGCGCCGC
GCGGCGCTCG GCGCGATCGA GGCGTTGATC GGCGCGACAT ACGCGCGCGA GCGGCGGCTG
GCGCGCCCGC ACGCGGACGC CGGCTGA
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| Protein sequence | MGIGRAGGQR DAARDRADAQ TLHGRPVMSS IIGGASAARR GFSIDGTGSA ANRLDAEPSL
DDAPQTGAAG AAGAAGAADV QAQLAGVDEE AANAAAQFGR FRASERKGRR SDDLERILDT
DADEKLDELA ALLGGRAPRG RVDLATLLRD ARERFRDESD LLLALRELRR RRRLDGESVD
VVERAIDELL AGDGNKRIKA GINAALKAKV FGARMQLDPR RLRELYRQFL EFDGSHLVVY
EDWIEQFGAS RRKRILDYVS AALSYDMQSH DPSCGCAAEF GPLLGTLHRA RMLASADEQF
VGRLLDDALA RDCGLTEERA LATMLGGLQR PFSVADVLLR ALGDLLEPLS AARRSQLLQL
ALRAFAGVPI ALYGDADARR AALGAIEALI GATYARERRL ARPHADAG
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