| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0828 |
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| Symbol | |
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| ID | 3844555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 968241 |
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| End bp | 970100 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637838131 |
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| Product | type III secretion system protein BsaO |
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| Protein accession | YP_439025 |
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| Protein GI | 83717183 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0276407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTATG CCGACAGGGC CAGACGATAC GCAGCCGCGC TTGCCGCGTC GCTGCTGATG
ACGGGCGCGG CGTTCGCCGC GCCGACCGAC GCGGCGCCGA GCGCCGACGC GCCCGCGGCG
GCGAGCGCGA CGCTCGACAC GCAGGACGGC GACGCGCCGC CGGCGCGCGC GCCGCAGGAC
GACGAGCGCC ACTTCGTCGC GAACGATGCG AGCATCGGCG TGCTGCTCAA TGCGCTGTCG
GGCCGGCTGC ACAAGCCGGT CGTCGCGAGC GAGAAGGTGC GCCGCAAGCA CGTGACGGGC
GAATTCGACC TCTCGCAGCC GCGCGCGCTG CTCGCGCGGC TCGGCGAATC GATGGCGCTG
CTCTGGTACG ACGACGGCGC GTCGATCTAT ATCTACGACA ACTCCGAGAT CAAGAACGCG
GTGGTCTCGA TGCGCCACGC GACGGTGCGC AACCTGCGCG ATTTCATCCG GCAGACGCGG
CTCTACGATC CGCGCTTTCC GGTGCGCGGC GACGACCTGA GCAACACGTT CTACGTGACG
GGCGCGCCCG TCTACGTGAA TCTCGTCGCC GCCGCCGCGC GCTATCTCGA CGAGGTGCGC
TCGAACGAGG CGAGCGACAG GCAGGTCGTG CGCGTCGTGC AGCTTCACAA CAGCTTCGTC
GTCGACCGCC AGTACACGCT GCGCGACAAG GAGGTCGACA TTCCGGGCAT GGCGACCGTG
CTCGGCCGCA TCTTCGGCCC GGCGCGGCAG GGCACGCCCG CCGCGGCGGC CGACGCCACG
GCGCGCGGCG GCGCGGGCGG CGCCGCCGGC AAGCCGGCAT TCTCGCTCGC CGACGCGTTG
CCCGCGCCGC TTGACGCAGG CAACGCGCCG GGCGGCGCAG GCTCGGCGAA TTCGACAAAC
CCGGCGAACC CGACGAACGC CGCGAGCCCG ATGGGCGGCG CGGCGGGCGG CGTCGCGCTG
CCCGCGTCGG ACGGCGTGCG CGCGGTTGCG TATCCGGACA CGAACAGCGT GATCCTCGTC
GGCCGGCTCG ACAAGGTGCA GGACATGGAG GCGCTGATCC GCTCGCTCGA CGTCGAGAAG
CGGCAGATCG AGCTGTCGCT GTGGATCATC GACATCAGGA AGAGCCGGCT CGATCAGCTC
GGCATCGACT GGCAGGGCGC GCTCAATGCG CCGGGCATCG GCGTCGGCTT CAACAATCGC
GGCGGCAACG TGACGACGCT CGACGGCACC AAATTCCTCG CATCGGTCGC GGCGCTCAGC
CAGACGGGCG ACGCCACCGT GATCTCACGG CCGATCGTGC TCACGCAGGA GAACGTACCG
GCGACGTTCG ACAGCAACCA GACGTTCTAC GCGAAGCTGA TCGGCGAGCG CACGGTGCAG
CTCGATCATG TGACCTACGG CACGCTCGTC AACGTGCTGC CGCGGCTCAC GCGCGATGCG
TCACAGGTCG AGATGATCGT CGACATCGAG GACGGCAACA CCGACGGCGC GACGAGCGAC
GGCCAGATCG TCATCGACAA CAACACGATG CCGCTCGTGA ACCGCACCGA GATCAACACG
GTCGCGCGCG TGCCGCACGA GATGAGCCTG CTCATCGGCG GCAACACGCG CGACGACGTC
ACGCGCCGCA CGTTCCGGAT TCCCGGGCTG GCCAGCCTTC CGCTGATCGG CGGGCTGTTT
CGCGGGCATT CGGATCGGCA CGAGCAGGTG GTGCGCGTGT TCCTGATCCA GCCGAAGCTG
CTGCGCGCGG GCGCGGCCTG GCCCGACGGC CAGCCGTGGG AATCGGGAGG GCCGGCGGAC
AACGCGACGC TGCGCGCGAC CGTGCAGATG CTCAAACCCT ACATGGACGA CCAGTCATGA
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| Protein sequence | MMYADRARRY AAALAASLLM TGAAFAAPTD AAPSADAPAA ASATLDTQDG DAPPARAPQD
DERHFVANDA SIGVLLNALS GRLHKPVVAS EKVRRKHVTG EFDLSQPRAL LARLGESMAL
LWYDDGASIY IYDNSEIKNA VVSMRHATVR NLRDFIRQTR LYDPRFPVRG DDLSNTFYVT
GAPVYVNLVA AAARYLDEVR SNEASDRQVV RVVQLHNSFV VDRQYTLRDK EVDIPGMATV
LGRIFGPARQ GTPAAAADAT ARGGAGGAAG KPAFSLADAL PAPLDAGNAP GGAGSANSTN
PANPTNAASP MGGAAGGVAL PASDGVRAVA YPDTNSVILV GRLDKVQDME ALIRSLDVEK
RQIELSLWII DIRKSRLDQL GIDWQGALNA PGIGVGFNNR GGNVTTLDGT KFLASVAALS
QTGDATVISR PIVLTQENVP ATFDSNQTFY AKLIGERTVQ LDHVTYGTLV NVLPRLTRDA
SQVEMIVDIE DGNTDGATSD GQIVIDNNTM PLVNRTEINT VARVPHEMSL LIGGNTRDDV
TRRTFRIPGL ASLPLIGGLF RGHSDRHEQV VRVFLIQPKL LRAGAAWPDG QPWESGGPAD
NATLRATVQM LKPYMDDQS
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