Gene BTH_II0777 details

Gene Information

• Locus tag: BTH_II0777
• ID: 3844891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 906894
• End bp: 908711
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637838080
• Product: type II/III secretion system protein
• Protein accession: YP_438974
• Protein GI: 83717709
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1450] Type II secretory pathway, component PulD
• TIGRFAM ID: [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.296744
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCCA AGATCCCCGT TTTGCTGACC CTGCTGTCCC TGCTGTGCTC GCTCGCGAGC 
CTTTCCGCCG ATGCCGCGCC GATCCGCTGG CGCAGCACCG AAATCCAGTA CGCGGCGGAA 
GGCAAGGACG TGAAGGACGT GCTGCGCGAT CTCGCCGCGA GTCAGAACAT CGCGGCGAAT 
GTCGCGCCCG GCGTGAGCGG CGCCGTCAGC GGCAAGATGA AGATGTCGCC GCAGCGCTTT 
CTGGACACGC TCGCCGCATC GTTCGGCTTC GTCTGGTATT ACGACGGCAC GGTGCTGTAC 
GTGACGCCCG CGAGCGACAT GAAGAGCACG CTCGTCAAGC TCGATCACGC GAACACGGGC 
GACCTGCGCG ATCTGCTCGA ACAGATGAAG GTGGCCGACC CGCGCTATCC GATGACCTAC 
AACGCGCAGC AGCGTACGGC GCTCGTCGCG GGGCCGCCGC GCTATGTCGA GCTCGTGACG 
AGCGTCGCCG AGCGGCTCGA CGAGAATTCC GCGCGCACGG GCGGCACGCA GATCCGCGTG 
TTCTCGCTGA AGCACGCGTG GGCCGCCGAC CGCGACGTGA ACGTCGACGG CACGACGGTG 
TCGATGCCGG GCGTCGCGTC GCTGCTGAAC CGGATGTATC ACCCGGGCGA CGGCAAGCGC 
GCGTCACAGA CGACGGTCGG CAAGCCGATC AGCCGCGCCG CGCCGATGAC GGATCTCGGC 
GGCGGACGCG GCGGCGTGCC GCCGTTGCCG CCGCTGCCGC CATACCTGCA GGCCGCGCAG 
CCGGGCGACG GCGCGGGCAT GCCGGCGGGC AGCCCCGGCG GACAGGGCGG CGATCCGCGT 
GCGGGCGGCA TGTTCGCCGC GGCGATCGCG AATCCGGGCG CGGGGCGCGC GCCCGGCGGC 
GGCATGCCCG ACGCGAACGG CGTGCCCGGC GGCGCGGGCG ACGCGGCCGA TCTGCCGGTG 
ATCCAGGCCG ATCCGCGCAC GAACTCGATC CTCGTGCGCG ACGTGCCCGA GCACATGGCG 
CAGTATCCGG ACCTCATCGC GCTCCTCGAC GTGAAGCCGC GCCTGATCGA GATCGAGGCG 
CGCATCATCG AGATCGACGA AGGCGCGCTC AAGCAGCTCG GCGTCGACTG GCGCGCGCAC 
AACAGCCATG TCGACCTGCA GACGGGCACG GGGCTCACGT CGCAGAATTC GTATGCGAAC 
GGCACGCTGA ATCCGACGTT CGGCTCGATC TCGCTTGCCG GCAACGATTC GGTCGGCGTG 
CCGGCGAGCC CGCTCGGCCT GTCGCTGACG GCCGTGCTCG GCGACGCCGG CCGCTATCTG 
CTTGCGCGGA TCGACGCGCT CGAATCGTCG AACCAGGCGC GCACCGACGC GAGCCCGAAA 
GTCACGACGC TAGACAACGT CGAGGCGGTG ATGGACAACA AGAAGCAGTT CTTCGTGCGC 
GTCGCGGGCT ACACGTCGGC CGACCTGTAC AGCATCTCGA CGGGCGTGTC GCTGCGCGTG 
CTGCCGATGG TCGTCGAGGA AGGCGGGCGC ACGCAGATCA AGCTCGACGT GCGGATCGTC 
GACGGCGAGC TGTCGCAGCA GAGGGTCGAC AACATTCCGG TGATCGTGTC GAACGAGATC 
AACACGCAGG CGTTCATCGA GCAGGGGCAG GCGCTCCTGA TCGCGGGCTA CAAGGTGGAC 
GCTCGCTCGA GCACGCAATC GGGGGTGCCG GTGCTGTCGA AGCTGCCGCT GCTGGGCGCG 
CTGTTCCGTT CGACCGACAA GCAGGACAGC CACAGCGAGC GGCTCTTTCT CGTGACGCCG 
AGGGTGATCG AGCCTTGA 

 

Protein sequence

MKAKIPVLLT LLSLLCSLAS LSADAAPIRW RSTEIQYAAE GKDVKDVLRD LAASQNIAAN 
VAPGVSGAVS GKMKMSPQRF LDTLAASFGF VWYYDGTVLY VTPASDMKST LVKLDHANTG 
DLRDLLEQMK VADPRYPMTY NAQQRTALVA GPPRYVELVT SVAERLDENS ARTGGTQIRV 
FSLKHAWAAD RDVNVDGTTV SMPGVASLLN RMYHPGDGKR ASQTTVGKPI SRAAPMTDLG 
GGRGGVPPLP PLPPYLQAAQ PGDGAGMPAG SPGGQGGDPR AGGMFAAAIA NPGAGRAPGG 
GMPDANGVPG GAGDAADLPV IQADPRTNSI LVRDVPEHMA QYPDLIALLD VKPRLIEIEA 
RIIEIDEGAL KQLGVDWRAH NSHVDLQTGT GLTSQNSYAN GTLNPTFGSI SLAGNDSVGV 
PASPLGLSLT AVLGDAGRYL LARIDALESS NQARTDASPK VTTLDNVEAV MDNKKQFFVR 
VAGYTSADLY SISTGVSLRV LPMVVEEGGR TQIKLDVRIV DGELSQQRVD NIPVIVSNEI 
NTQAFIEQGQ ALLIAGYKVD ARSSTQSGVP VLSKLPLLGA LFRSTDKQDS HSERLFLVTP 
RVIEP