Gene BTH_II0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0772 
Symbol 
ID3846212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp901291 
End bp902907 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content71% 
IMG OID637838075 
Producttype II/IV secretion system protein 
Protein accessionYP_438969 
Protein GI83718165 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.182118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGG GCGCGCAACG AACCGACACG GCGGCCGCGC GCGCGACGCC GCCCGCCGCC 
GACGCGGCTG CGGCCGCGCC GCCGCGCGGC CCGCGCGCCG TCAGCGAAGC GGGCGACTTC
GCCGCGAGCG TCGAGGAGCG CAAGTTCGTC TGCCTGTTCG ACGACGGGCG GCTGCTGATC
GCCGAAGGCC ACGAGATGAA TCCGTTCGTG CTGTCGTATC GCGCGCGGCT CGACCGGATG
GGCCGGCCGT ACCGGCCGAC GCCGGCCACG CTGATGCAGG TGCGCGAGGC GTACCGGCAG
CACGTCGCGG GCGGCGGCGA GCGGCTCGAT CACACGGTGA TGCAGGTGCT CGCGAAGGAG
CTGATCGGCC GCGCGTGCCG CGAGCGCGCA TCCGACATCC ACATTCGCGT GCGCCGTTTC
AGCACCGAGG TCTACTTCCG GATTCACAAC GATCTCGTGC GCGTGAACGA GCACACGCGC
GAGCACGGCG AGCGGCTGCT CGCGACGCTG TACGGCGCGA TGACGACCGT GTCGGACAAC
AGCTACCGCC CGAGCGAGCG GCAGGACGCG AGCATCGGCG ATCGCGACAA GTTGCCGGAC
GACCTGTACG GTGTGCGGAT CGCGACGACG CCGACGAGCG AAGGCAGCCT GATGGTGCTG
CGGCTGCTGT ACAACGACGC GGGCGACGCG ACCGATCTCG CGGCGCTCGG CTTCGCGCCC
GAGCACGTCG CCGCGTTTCG CGCGCTGCGC GCGCAGCCGC ACGGCATGAA CATCATCAGC
GGCCCGACGG GCTCCGGCAA GTCGACGACA TTGCAGCGCA TGCTCGCCGC GCAGATCGAC
GAATCGCACG GCAGCCTGCA TGTGATCACC GTCGAGGACC CGATCGAATA TCCGATCGAC
GGCGCGGTGC AGACGCCGGT GGCGAACGCG CCGACCGAGG ACGCGCGCGC GCTCGCGTTC
GCGGCGGCGA TCACGAACGC GATGCGCCTC GACCCGGACA CGATCATGAT CGGCGAGATC
CGCGATCGCG CGTCCGGGCA GACCGCGCTG CGCGCGTCGA TGACGGGCCA TCAGGTATGG
ACGACCGTGC ACGCGAACAG CGCGCTCGCG ATCGCCGACC GCCTCATCGA TCTCGGCCTG
CACGCGCGGA TGGTCACCGA TCACACGGTG ATCTCCGGGC TCATCAGCCA GCGTCTCGTG
AAGCTGCTGT GCCCGCATTG CAAGCTGCGT CTCGTCGATC GTCCGGAGCG GATCGAGCCG
GGCCTCTTCG CGCGGTTGCG GCTCGCGCTC GACACGCGGA TGCAAGACGT GTGCATCGAG
GGCGACGGCT GTGCGCAGTG CGCCGAGGCC GGCACGATCG GCCGCACGGT GGTTGCCGAA
GTGATCCTGC CCGATGCGCG GCTCTTCGAG TTCCTGCGCG ACGGCGACAA GATCGGCGCG
CTCGAGTACT GGACCCGCAC GCTCGGCGGG ATGACGCTCG CCGAGCACGC GCTGCGCAAG
GTCGCGGCGG GGCTCGTCGA CCCGCGCGGC GTCGAGCGCG TCGTCGGCAC GCTCGCGCCG
GTGGCGGGCG AGGCGCGGCA GCAACTGTCG CTCGTCGGAT TCAGCTATGG CACTTGA
 
Protein sequence
MSQGAQRTDT AAARATPPAA DAAAAAPPRG PRAVSEAGDF AASVEERKFV CLFDDGRLLI 
AEGHEMNPFV LSYRARLDRM GRPYRPTPAT LMQVREAYRQ HVAGGGERLD HTVMQVLAKE
LIGRACRERA SDIHIRVRRF STEVYFRIHN DLVRVNEHTR EHGERLLATL YGAMTTVSDN
SYRPSERQDA SIGDRDKLPD DLYGVRIATT PTSEGSLMVL RLLYNDAGDA TDLAALGFAP
EHVAAFRALR AQPHGMNIIS GPTGSGKSTT LQRMLAAQID ESHGSLHVIT VEDPIEYPID
GAVQTPVANA PTEDARALAF AAAITNAMRL DPDTIMIGEI RDRASGQTAL RASMTGHQVW
TTVHANSALA IADRLIDLGL HARMVTDHTV ISGLISQRLV KLLCPHCKLR LVDRPERIEP
GLFARLRLAL DTRMQDVCIE GDGCAQCAEA GTIGRTVVAE VILPDARLFE FLRDGDKIGA
LEYWTRTLGG MTLAEHALRK VAAGLVDPRG VERVVGTLAP VAGEARQQLS LVGFSYGT