Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0772 |
Symbol | |
ID | 3846212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 901291 |
End bp | 902907 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637838075 |
Product | type II/IV secretion system protein |
Protein accession | YP_438969 |
Protein GI | 83718165 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.182118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGG GCGCGCAACG AACCGACACG GCGGCCGCGC GCGCGACGCC GCCCGCCGCC GACGCGGCTG CGGCCGCGCC GCCGCGCGGC CCGCGCGCCG TCAGCGAAGC GGGCGACTTC GCCGCGAGCG TCGAGGAGCG CAAGTTCGTC TGCCTGTTCG ACGACGGGCG GCTGCTGATC GCCGAAGGCC ACGAGATGAA TCCGTTCGTG CTGTCGTATC GCGCGCGGCT CGACCGGATG GGCCGGCCGT ACCGGCCGAC GCCGGCCACG CTGATGCAGG TGCGCGAGGC GTACCGGCAG CACGTCGCGG GCGGCGGCGA GCGGCTCGAT CACACGGTGA TGCAGGTGCT CGCGAAGGAG CTGATCGGCC GCGCGTGCCG CGAGCGCGCA TCCGACATCC ACATTCGCGT GCGCCGTTTC AGCACCGAGG TCTACTTCCG GATTCACAAC GATCTCGTGC GCGTGAACGA GCACACGCGC GAGCACGGCG AGCGGCTGCT CGCGACGCTG TACGGCGCGA TGACGACCGT GTCGGACAAC AGCTACCGCC CGAGCGAGCG GCAGGACGCG AGCATCGGCG ATCGCGACAA GTTGCCGGAC GACCTGTACG GTGTGCGGAT CGCGACGACG CCGACGAGCG AAGGCAGCCT GATGGTGCTG CGGCTGCTGT ACAACGACGC GGGCGACGCG ACCGATCTCG CGGCGCTCGG CTTCGCGCCC GAGCACGTCG CCGCGTTTCG CGCGCTGCGC GCGCAGCCGC ACGGCATGAA CATCATCAGC GGCCCGACGG GCTCCGGCAA GTCGACGACA TTGCAGCGCA TGCTCGCCGC GCAGATCGAC GAATCGCACG GCAGCCTGCA TGTGATCACC GTCGAGGACC CGATCGAATA TCCGATCGAC GGCGCGGTGC AGACGCCGGT GGCGAACGCG CCGACCGAGG ACGCGCGCGC GCTCGCGTTC GCGGCGGCGA TCACGAACGC GATGCGCCTC GACCCGGACA CGATCATGAT CGGCGAGATC CGCGATCGCG CGTCCGGGCA GACCGCGCTG CGCGCGTCGA TGACGGGCCA TCAGGTATGG ACGACCGTGC ACGCGAACAG CGCGCTCGCG ATCGCCGACC GCCTCATCGA TCTCGGCCTG CACGCGCGGA TGGTCACCGA TCACACGGTG ATCTCCGGGC TCATCAGCCA GCGTCTCGTG AAGCTGCTGT GCCCGCATTG CAAGCTGCGT CTCGTCGATC GTCCGGAGCG GATCGAGCCG GGCCTCTTCG CGCGGTTGCG GCTCGCGCTC GACACGCGGA TGCAAGACGT GTGCATCGAG GGCGACGGCT GTGCGCAGTG CGCCGAGGCC GGCACGATCG GCCGCACGGT GGTTGCCGAA GTGATCCTGC CCGATGCGCG GCTCTTCGAG TTCCTGCGCG ACGGCGACAA GATCGGCGCG CTCGAGTACT GGACCCGCAC GCTCGGCGGG ATGACGCTCG CCGAGCACGC GCTGCGCAAG GTCGCGGCGG GGCTCGTCGA CCCGCGCGGC GTCGAGCGCG TCGTCGGCAC GCTCGCGCCG GTGGCGGGCG AGGCGCGGCA GCAACTGTCG CTCGTCGGAT TCAGCTATGG CACTTGA
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Protein sequence | MSQGAQRTDT AAARATPPAA DAAAAAPPRG PRAVSEAGDF AASVEERKFV CLFDDGRLLI AEGHEMNPFV LSYRARLDRM GRPYRPTPAT LMQVREAYRQ HVAGGGERLD HTVMQVLAKE LIGRACRERA SDIHIRVRRF STEVYFRIHN DLVRVNEHTR EHGERLLATL YGAMTTVSDN SYRPSERQDA SIGDRDKLPD DLYGVRIATT PTSEGSLMVL RLLYNDAGDA TDLAALGFAP EHVAAFRALR AQPHGMNIIS GPTGSGKSTT LQRMLAAQID ESHGSLHVIT VEDPIEYPID GAVQTPVANA PTEDARALAF AAAITNAMRL DPDTIMIGEI RDRASGQTAL RASMTGHQVW TTVHANSALA IADRLIDLGL HARMVTDHTV ISGLISQRLV KLLCPHCKLR LVDRPERIEP GLFARLRLAL DTRMQDVCIE GDGCAQCAEA GTIGRTVVAE VILPDARLFE FLRDGDKIGA LEYWTRTLGG MTLAEHALRK VAAGLVDPRG VERVVGTLAP VAGEARQQLS LVGFSYGT
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