| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0751 |
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| Symbol | |
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| ID | 3846290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 880103 |
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| End bp | 882175 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637838054 |
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| Product | type III secretion inner membrane protein SctV |
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| Protein accession | YP_438948 |
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| Protein GI | 83717211 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.531496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGA AATCCCTCAA ACTTCCCGCC GGCGGCGAGG TCGGCATCAC GGTGCTCGTC
GTCGCGATCG TGTCGCTGAT GATCCTGCCG CTGCCGCCCG AGGTGATCGA CGTGCTGCTC
GGCGTGAACA TCGCGATCAG CGTCACGCTG CTGATGGTGA CGATGTACGT CGGCAGCATC
GTGTCACTGT CGGTGTTTCC GTCGGTGCTG CTGTTCACGA CGCTGTACCG GCTGTCGCTG
AACATCGCGT CGACGAAGTC GATCCTGCTG CACGCGAACG CGGGCGACAT CATCGAGAGC
TTCGGCGAGC TCGTCGTCGG CGGCAATCTC GTCGTCGGCC TCGTCGTGTT CCTGATCATC
ACGACCGTGC AGTTCATCGT GATCGCGAAG GGCTCGGAGC GCGTCGCCGA AGTCGGCGCG
CGCTTCACGC TCGACGCGAT GCCCGGCAAG CAGATGAGCA TCGACGCGGA CCTGCGCGCG
AACATCCTCA CGCCCGACGA GGCGCGCCGC AAGCGCGCGA CGCTCGCGAA GGAGAGCCAG
CTGCACGGCG GGATGGACGG CGCGATGAAG TTCGTCAAGG GCGACGCGAT CGCGGGGCTC
ATCATCACGC TCGTGAACAT CGTCGCGGGC ATCGCGATCG GCGTGATGTA CCACGGGATG
ACGGCGGGGG AAGCGGCGAA CCGCTTCTCG ATCCTGTCGG TCGGCGACGC GATGGTGTCG
CAGATCCCGT CGCTCCTGAT CTCGGTCGCG GCGGGCGTGA TGATCACGCG CGTCGCCGAC
GATCATGACG AAGGCGAGGG CGCGTCGCTC GGCTCCGAGA TCGCGAGGCA ACTGGGCGGC
AGCCATCGCG CGCTGTATTT CGCGGCGGTG CTGCTGCTCG GCTTCGCCGC GGTGCCGGGC
TTTCCGGCGG CGCTCTTCGC GCTGCTGTCG GCGACGCTCG CGTTCGCCGG CTACCGGCTG
CACAAGGGCG CGCGCCGCAC GACCGCGCGC GGCGAGCCGG TGATCGCGCT GCAGCGCGCG
GGCGCGAAGA GCGGCACGCC GTCGATCCTG CCGCGCGCGC CGCTCTTCAC GTGCGCGATC
GGCGTGCGCG TCGCGCCCGA TCTCGTCGCG CGGCTCGCGC CCGCCGCGCT CGACCGCGCG
TTCGACGAGG AGCGCGCGAA GCTGCAGGAG GAGCAGGGGC TGCCGTTTCC CGGCATCACG
CTGTGGACGA GCGACGCGCT GCCCGAATCG ACGTGCGAGA TCCTGATGCG CGACGTGCCG
CAGACGCGGC TCGAATTGCC GGCCGACCAG ACGATGCTGC CCGATGCGGC GTCCGATCCC
GCGCTCGCCG GCCGCTGCAC GAAACGCGGG CCGGCGGGCG GCCTCGCGCA GAGCTACTGG
ATCGACGACA AGGCGGCGCC GGCCGGCGTG CGCGCATGGC GCGCCGAGCA GGTGATCGCG
CACGAGACGA TCGCGCTGCT TAGGCGCAAC GCCTATCTGT TCCTCGGCAT TCAGGAAACC
CAGTGGATTC TCGATCAGCT CGGCCTCGAC TATCCGGGGC TCGTCGCCGA GGTGCAGAAG
GCGCTGCCGA CGCAACGGAT CGCCGACGTG CTGCGCCGCC TGCTCGAAGA GCACATCCCG
ATCCGCAACG CGCGCGACAT CATGGAGAGC CTCGTCGCGT GGGGGCCGAA GGAGAAGGAC
ATGCTGATGC TCGCCGAATA CGTGCGCGGC GACCTGTCGC GCTATCTCGC GTATCGGGCG
GCGCGCGGCG CGCGGCAATT GCCGGCGGTG CTGCTCGACA TGGCGGTCGA GCAGCACATC
CGGCAATCGA TCAAGCAGAC GCCCGCCGGC AACTTCCTCG CGCTGCCGCC CGAGCAGGTG
CGCTACCTGG TCGACAGCGT GGCGTCGTTC GTCGGCGATG CGCCGCGCGA CGACGTCGCG
CTCGTCACGT CGATGGACGT GCGCCGCTAC ACGCGGCGGA TGATCGAGGC GCGGCTCGGC
TGGCTGCCCG TCTATTCGTA TCAGGAGCTG GGCGACCAGG TTCAATTGCA GCCGCTCGGC
CGCGTGACGA TGCCGCAGGC GGCCCACGCA TGA
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| Protein sequence | MTLKSLKLPA GGEVGITVLV VAIVSLMILP LPPEVIDVLL GVNIAISVTL LMVTMYVGSI
VSLSVFPSVL LFTTLYRLSL NIASTKSILL HANAGDIIES FGELVVGGNL VVGLVVFLII
TTVQFIVIAK GSERVAEVGA RFTLDAMPGK QMSIDADLRA NILTPDEARR KRATLAKESQ
LHGGMDGAMK FVKGDAIAGL IITLVNIVAG IAIGVMYHGM TAGEAANRFS ILSVGDAMVS
QIPSLLISVA AGVMITRVAD DHDEGEGASL GSEIARQLGG SHRALYFAAV LLLGFAAVPG
FPAALFALLS ATLAFAGYRL HKGARRTTAR GEPVIALQRA GAKSGTPSIL PRAPLFTCAI
GVRVAPDLVA RLAPAALDRA FDEERAKLQE EQGLPFPGIT LWTSDALPES TCEILMRDVP
QTRLELPADQ TMLPDAASDP ALAGRCTKRG PAGGLAQSYW IDDKAAPAGV RAWRAEQVIA
HETIALLRRN AYLFLGIQET QWILDQLGLD YPGLVAEVQK ALPTQRIADV LRRLLEEHIP
IRNARDIMES LVAWGPKEKD MLMLAEYVRG DLSRYLAYRA ARGARQLPAV LLDMAVEQHI
RQSIKQTPAG NFLALPPEQV RYLVDSVASF VGDAPRDDVA LVTSMDVRRY TRRMIEARLG
WLPVYSYQEL GDQVQLQPLG RVTMPQAAHA
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