Gene BTH_II0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0750 
Symbol 
ID3845166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp879024 
End bp880106 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID637838053 
Producttype III secretion system protein HrcU 
Protein accessionYP_438947 
Protein GI83717264 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR01404] type III secretion protein, YscU/HrpY family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0905461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAG AGAAAACCGA AGAGCCCACC GAGCGGAAGC TGAAGAAGGC CCGGGAGAAG 
GGCCAGGTCG CGAAGAGCAA GGACGTCGCG GACGCGGCGA CGCTGGCGGC CGCGATCGGC
GTGCTGACGG CGGGCGAGGC GATGCTGACG GGCGGCCTGT CGCGCGCGAT CCGCACCGCG
CTCGATTTCG TGCACGGCGA GCGCACGCCG CAGGCGACGC TCGCCGCGTT GCACGATCTC
GCCGCGAGCG CCGGGCTGAC GATGCTGCCG TTCGTCGCCG CCGCGATCGT CGCGGGCGTT
GCATCGCAAG CGCCGCAGGC GGGTTTCATG ATCACGCTCG AACCCGTGAT GCCGAAGTTC
GACGCGATCA GCCCGATGGC GGGGATCAAG CGGATCTTCT CGACGAAATC GCTGCTCGAG
CTCGTGAAGA TGATCGTCAA GGCGATCGTG CTCACGTGCG TGATCTGGAA GATGATGACA
TCGCTGTTTC CGCTCGTCGT CGCGAGCGTG TACGAGGCGA CGCCGCAGCT TTCGCGCGTG
CTGTGGACCG TGCTGATGAA ACTGTTCGGC GTCGTCGCGC TCGTCGTCGC GGTGTTCGCC
GCGGCCGATT ACAAGATCTC GCGCGCGATG TTCATCCGCG ACAACCGGAT GACGAAGGAG
GAGACCAAGC GCGAGCACAA GGAGAGCGAG GGCGATCCGC ACACGAAGGG CGAGCGCCGC
CGGCTCGCGC GCGAGATCGC GACGAGCGCG CCGCCGCGGC AGAAGGTCGG CCAGGCGAAC
GTGCTCGTCG TCAACCCGAC GCACTACGCG GTCGCGATCC GCTACGCGCC CGACGAGCAT
CCGTTGCCGC GGGTGATCGA GAAAGCCGTC GACGACGGCG CGCTCGCGCT GCGCCGCCAC
GCGCACGCGC TCGGCGTGCC GATCGTCGGC AACCCGAGCG TCGCGCGCGC GCTGTACCGC
GTCGAGCGCG ACGCGGCGAT TCCCGAAGAA CTGTTCGAAA CGGTGGCCGC GATCCTGCGC
TGGGTCGAGT CCATCTCGGG CGTGCGCGCC GACGCCGCCG TTCCCTGCGC GAGGTCGTCA
TGA
 
Protein sequence
MAEEKTEEPT ERKLKKAREK GQVAKSKDVA DAATLAAAIG VLTAGEAMLT GGLSRAIRTA 
LDFVHGERTP QATLAALHDL AASAGLTMLP FVAAAIVAGV ASQAPQAGFM ITLEPVMPKF
DAISPMAGIK RIFSTKSLLE LVKMIVKAIV LTCVIWKMMT SLFPLVVASV YEATPQLSRV
LWTVLMKLFG VVALVVAVFA AADYKISRAM FIRDNRMTKE ETKREHKESE GDPHTKGERR
RLAREIATSA PPRQKVGQAN VLVVNPTHYA VAIRYAPDEH PLPRVIEKAV DDGALALRRH
AHALGVPIVG NPSVARALYR VERDAAIPEE LFETVAAILR WVESISGVRA DAAVPCARSS