| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0711 |
|---|
| Symbol | selA |
|---|
| ID | 3844746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 833421 |
|---|
| End bp | 834908 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637838016 |
|---|
| Product | selenocysteine synthase |
|---|
| Protein accession | YP_438910 |
|---|
| Protein GI | 83717313 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGAT CTGCCGGCCG AACCCGCCGC GGAGGAAGCG CGGACGTGAG CGGGCCCGGC
GCGAATGAAC TGAACGCGCT GCTCGCGCGC GTGCCGTCGG TCGAGCGCGT GCTGTCGTCG
GACGAAATGA AGCCGCTCGT CGACGAATAC GGGCGCACGC GCGCGCTCGC CGCGGTGCGC
GCGACGCTCG ACGCGTGGCG CGACGCCGCG CGCCGCGATC CGGCCGCGGC CGGGACGCTC
GACGACGCGC GCGTCGCCGC CGACGTGCGC GCGCGGCTCG CCGCCGATGC GGCGGGCGCG
ATGCGCGCGG TGTTCAATCT GACGGGCACC GTGCTGCACA CGAATCTCGG CCGCGCGCTG
TTGCCGGACG AAGCGGTGCG CGCGGTCGTG CGGGCGCTCA CACAGCCGAT GAATCTCGAA
TTCGATCTCG CGACGGGCCG CCGCGGCGAC CGCGACGACC TGATCAACGC GCTCGTCTGC
GAGCTGACGG GCGCCGAGGC GGCCACCGTC GTCAACAACA ACGCGGCCGC CGTGCTGCTC
GCGCTGTCCG CGCTTGCGCC GAAGAAGGAA GTGATCGTGT CGCGCGGCGA GCTCGTCGAG
ATCGGCGGCG CGTTCCGGAT TCCCGACATC ATGAGCCGCG CGGGCGCGAA GCTGCGCGAG
GTCGGCACGA CGAACCGCAC GCATCTGAAG GACTATGCGG AAGCGATCGG GCCGCGCACC
GCGCTGCTGA TGAAAGTGCA TTGCAGCAAT TACGCGATCA GCGGCTTCAC GACGGAAGTG
ACGCTGCAGG AACTCGCGCC GCTCGCGCGG GAGCATGGGG TGCCCGTCGC CGTCGATCTC
GGCAGCGGCA CGCTCGTCGA CCTGACACGC TGGGGCCTGC CGAAGGAGAC GACGGTGCGC
GAGACCGTCG AAGCGGGCGC GGATCTCGTC ACGTTCAGCG GCGACAAGCT GCTCGGCGGC
CCGCAGGCGG GCCTCGTCGT CGGGCGGCGC GACCTGATCG CGAAGATCAA GAAGCATCCG
CTCAAGCGCG CGCTGCGCGT CGGCAAGCTG ACGCTCGCCG CGCTCGAGCC GGTGTTGCGC
CTGTACCAGG CGCCCGAATT CCTGCGCGAG CGGCTGACGA CGCTGCGGCT GCTCACGCGC
GCGCAGGCGG ACATCGCGGC GACGGCCGAG CGCGTGCGGC CGGCGCTGCA ACGCGCGATC
GGCGCGGCGT TCGCGGTCGA CGTCGAGCCG ATGTTCAGCC AGATCGGCAG CGGCGCGTTG
CCCGTCGATC AACTGCCGAG CTGCGGCCTC GTCGTGCGCG CGAGCGACGG CAAGCGCAGC
GGCCGCGCGC TCGCGCAGCT CGAGAAACGC CTGCGCGGCT GGCCGCGCCC GGTGCTCGGC
CGCGTCGCCG ACGACGCGCT GCGGCTCGAT CTGCGCTGCC TCGAAGCGGA CGACGAAGCG
GCATTCGTCG CGCAATGCGC GCAAGCGTCG ACGGATACGC GCGCATGA
|
|---|
| Protein sequence | MAGSAGRTRR GGSADVSGPG ANELNALLAR VPSVERVLSS DEMKPLVDEY GRTRALAAVR
ATLDAWRDAA RRDPAAAGTL DDARVAADVR ARLAADAAGA MRAVFNLTGT VLHTNLGRAL
LPDEAVRAVV RALTQPMNLE FDLATGRRGD RDDLINALVC ELTGAEAATV VNNNAAAVLL
ALSALAPKKE VIVSRGELVE IGGAFRIPDI MSRAGAKLRE VGTTNRTHLK DYAEAIGPRT
ALLMKVHCSN YAISGFTTEV TLQELAPLAR EHGVPVAVDL GSGTLVDLTR WGLPKETTVR
ETVEAGADLV TFSGDKLLGG PQAGLVVGRR DLIAKIKKHP LKRALRVGKL TLAALEPVLR
LYQAPEFLRE RLTTLRLLTR AQADIAATAE RVRPALQRAI GAAFAVDVEP MFSQIGSGAL
PVDQLPSCGL VVRASDGKRS GRALAQLEKR LRGWPRPVLG RVADDALRLD LRCLEADDEA
AFVAQCAQAS TDTRA
|
|---|
| |