Gene BTH_II0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0642 
Symbol 
ID3846338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp750383 
End bp751495 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID637837947 
Productspermidine/putrescine ABC transporter, ATP-binding protein 
Protein accessionYP_438841 
Protein GI83717491 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.680948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCG ATGATGTGAT CGTCAGCTTT CGCGGCGTGC GCAAGACTTA CGACGGCGAA 
ACGCTCGTCG TCAAATCGCT CGATCTGGAC ATCCGGCGCG GCGAATTCCT GACGCTGCTC
GGGCCGTCCG GCTCGGGCAA GACCACCTGC CTGATGATGC TCGCCGGCTT CGAATTCCCG
ACGGGCGGCG AGATTCGCCT CGACGGCGAG CTGCTGAACA ACGTGCCGCC GCACAAGCGC
AACATCGGCA TGGTGTTCCA GAACTACGCG CTCTTTCCGC ATCTGAGCGT CGAGCGGAAT
GTCGACTATC CGCTGAACGT GCGCCGCATG CCCGCCGCCG AGCGCAAGGA GCGCGTGGCA
GCCGCGCTCG CGATGGTGCA GATGGAGCGC TTCGCGAAGC GGTATCCGGC GCAACTGTCG
GGCGGCCAGC AGCAGCGGAT CGCGCTCGCG CGCGCGCTCG TGTTCGAGCC GAAGCTCGTG
CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAACTGC GCGAACACAT GCAGTACGAG
CTGAAAGCGC TGCACGAGAA GCTCGGCCTG ACCTTCGTCT ACGTGACGCA CGATCAGGGC
GAGGCGCTGA CGATGTCCGA TCGCGTCGCG GTGTTCGACA AGGGCATCGT GCAGCAGCTC
GACACCGTTG ACCGGCTCTA TGAATCCCCA TGCAACGAGT TCGTCGCGAA CTTCATCGGC
GACAGCAACC GGCTGCGCGG CACCGTCGCG AGCGTGAACG GCCAGTTCTG CGAATTCCGG
CTCGGCGACG GCACGCGTCT TGTCGGCCTG AACGCGGGCA ACGCGCAAGT GGGCGCGTCG
GGCGTCGCGT GCATTCGTCC CGAGCGGATG AACGTCGCGC CGGGCAGCGG CCTCGCGGCC
AACGGCGCGG CGGGCGGTGC GGCGAATGCG CTGTCCGGCG AGGCGCGCAG CCTCATCTAC
TTCGGCGATC ACGTCCGGAT GCGCTGCGCG CTGCCGGGGC AGGACGAGTG TTTCGTCAAG
GTGCCGCTCG GCACCGGCAC GCTCGACGCA TTCGCCCCCG GCTCGCCGAT CTCGCTCGAG
TTCCAGCCGG AGCATTTGCG GGTCTTCGCA TGA
 
Protein sequence
MKTDDVIVSF RGVRKTYDGE TLVVKSLDLD IRRGEFLTLL GPSGSGKTTC LMMLAGFEFP 
TGGEIRLDGE LLNNVPPHKR NIGMVFQNYA LFPHLSVERN VDYPLNVRRM PAAERKERVA
AALAMVQMER FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE
LKALHEKLGL TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDRLYESP CNEFVANFIG
DSNRLRGTVA SVNGQFCEFR LGDGTRLVGL NAGNAQVGAS GVACIRPERM NVAPGSGLAA
NGAAGGAANA LSGEARSLIY FGDHVRMRCA LPGQDECFVK VPLGTGTLDA FAPGSPISLE
FQPEHLRVFA