| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0608 |
|---|
| Symbol | |
|---|
| ID | 3845204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 710092 |
|---|
| End bp | 711888 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637837913 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_438808 |
|---|
| Protein GI | 83716874 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4655] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0969981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC CGACACGCCG CCCGACCACC GGTGATCTTT CCGACCGTCG CGAGCCGAAT
CGGCGGCGGC GCGCGCGCCG CTCGCCCGCG CGACAGCGCG GCTCGCTCGC CGTCATCGCG
GCGATCGCGA TCGGTGTCGT GATCGCCGCG CTCGGCGCGG TCGATCTCGG CAATCTGTTC
TATCAGCGCC GCGCGCTGCA AAGCGTCGCC GACCTGGCCG CGCTCGCGGC CGCGCAGACG
ATGGACGACG GCTGCACGCA GCCCGCCGCC ACCGCGCAAT CGGCCGCGCT CGGCAACGGC
TTCGACAGCG CCGCGTCGGG ACAATCGATG ACGGTCGTCT GCGGCAGATG GGACGTGAAG
GACAACGCAG GCCCCAGCTT CTTCGCAGGC TCGGCGTCGG GCACCGCGGC CGGCAGCGAT
GCACAGCTCA ATGCGGTCCA GGTGACGCTC ACGCGTGTCG TGCCGTACTA CTTCCTCGGT
GCGCAGCGCA CGGTCTCGGC GACCAGCACC GCGCAGGCGA CCAACGTCGG CGCCTATTCG
ATCGGCACGA CGCTCGCGCA ACTGCAAGGC GGCGTCGTGA ACGCGCTCCT CAACGGGCTG
CTCGGCGCGA ATCTGAACCT GTCGGTGCTG TCGTATCAGG GCCTCGCGAA TGCGCGAATC
CGGATCAAGG ACCTGATGGC CGCCGCGAAC GTCGGCACCG TGAACGCGCT GCTGAACACG
CAGACGACCG TCCCGCAGCT CGCGAACTGG ATGCTGACGG CGCTGTCGCA GACGTCGGTC
GCGAACGCCG ACTTGCAGAC GAGCATCGGC GCGCTGCAGA CGATCGTCAG CGCGAACGTC
CCCGGCGGCC AAACCTTCAC GATCGGCAGC ACCGCGAATT CGACGGGTAT CTTCTCGGTC
GGCCTGTCCG ACCCGCAAGC CGCGCTCGAC GCCACGTTCA GCCCGTTCGA CGCGCTTCTC
GTCGCGGCCG AGATCGCAAC CGGGCAAACG GCGTTCTCGC TCGCGAACGG GCTGAACGTC
GGCGGGCTGA ACGCGAGCCT GCAAGTGCAG ATCATCCAGC CGCCCGTGCT CGGCATCGGC
GAAGCAGGCA TCGATCCCGC CACGAAAACG TGGCGCACGA TCGCGCGCAC CGCGCAGGTG
CGGCTCTATC TGAACATCGG GCTCGGCACG GCGAACCTGC CGCTCGGCCT GCTCGGCGCG
CTCGTGCCGG TGCAGGTGAA CCTGCCGCTG TCGATGCAGA TCGCGCCGGG CCAAGCGTGG
CTGCAGTCGG CGAACTGCAC GGCGTCGCCG TCGACTTGCG CGTCGGCGAT CGGCGTGCAG
ACGGGCATCG CGAATCTGTG CGTCGGCGAC ACGCCGGCCA ACCTGTCCGC GTCGCTGCCG
TTCACCTGCT CGACGCCCGC GACGCTCGTC AACGTCGCGA ACCTCGTGAC GATCCAGTCG
CTTGCGTCGC TCCCGGCCGA CGTGCCTGCG AGCGAGACGC CCACGCTCAC GTTCTACGGC
ACGACGGGCG GCTATCAGAG CACGAACTCG AACGGCGTCG GCAGCGTGCT TGGCAACGCG
CTGTCGGGGC TCGGCACATC GCTGCAACAG ACTCAGATAT CGCTGATCGG CATCAGCCTG
CCGCTCGACC CGATCCAGGC CGCGCTCGAT TCGTTCCTGG GCGCCGTGCT GCCGCCGATG
CTGTCCGGAC TCGACGCCGC GGTCGTGCCG CTGCTGCAGT TGCTCGGCGT GCAGATCGGC
GAAAGCACGA TTCATGACAT GTCGCTAACC TGCGGGGTGT CGCAGCTCGT CTATTGA
|
|---|
| Protein sequence | MNKPTRRPTT GDLSDRREPN RRRRARRSPA RQRGSLAVIA AIAIGVVIAA LGAVDLGNLF
YQRRALQSVA DLAALAAAQT MDDGCTQPAA TAQSAALGNG FDSAASGQSM TVVCGRWDVK
DNAGPSFFAG SASGTAAGSD AQLNAVQVTL TRVVPYYFLG AQRTVSATST AQATNVGAYS
IGTTLAQLQG GVVNALLNGL LGANLNLSVL SYQGLANARI RIKDLMAAAN VGTVNALLNT
QTTVPQLANW MLTALSQTSV ANADLQTSIG ALQTIVSANV PGGQTFTIGS TANSTGIFSV
GLSDPQAALD ATFSPFDALL VAAEIATGQT AFSLANGLNV GGLNASLQVQ IIQPPVLGIG
EAGIDPATKT WRTIARTAQV RLYLNIGLGT ANLPLGLLGA LVPVQVNLPL SMQIAPGQAW
LQSANCTASP STCASAIGVQ TGIANLCVGD TPANLSASLP FTCSTPATLV NVANLVTIQS
LASLPADVPA SETPTLTFYG TTGGYQSTNS NGVGSVLGNA LSGLGTSLQQ TQISLIGISL
PLDPIQAALD SFLGAVLPPM LSGLDAAVVP LLQLLGVQIG ESTIHDMSLT CGVSQLVY
|
|---|
| |