| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0519 |
|---|
| Symbol | |
|---|
| ID | 3845983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 617354 |
|---|
| End bp | 618343 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637837824 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_438719 |
|---|
| Protein GI | 83716260 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTGC GCGAGCGTGC AGGCCGCGCG GACAAGCCGA TACCTCGAAA CACCGGAACG
CCGATGCAGC ACGACCACCG ACTCGATCTG AACCTGTTCC GCGTGCTCGA CGCGGTCTAC
GTGCAAGGCG GCATCAGCGC CGCCGCGCGC GCGCTGCACC TGACGCAGCC GGCCGTCACG
CACGCGCTGA ACCGGCTGCG CGCGCATTTC GGCGATCCGC TGTTCGTGCG TCAGGGCAAC
AAGGTCGTGC CGACCGAGCG CACGCGCGCT GTGATCGCCG ACGTCCAGCT CCATCTGAAA
GGCCTGCAGG ACGCGGCGCG CGCGCAGACG CGCTTCAGCG CGCAAGCGCT CGACATGAGC
TTCGTCGTCG GCGTGCGCGA CGTGCTCGAA TCGATCGCGC TGCCGCAACT CGTCGAGACG
CTCGCGCGCG ACGCACCCGG GGTGCGGCTC GTGAGCCGCC GCGTGCCCGT CGCCGACATC
GAGCGCGAGC TCGGCAGCGG CAACCTCGAT CTCGCGATCG AGCGCCGCGT GCCCGCCGGG
CCGCGAATGG CCGCCGAGTA CGTGGTCGAC GACACGCTCG TCGTCGCGAT GCGGCGCGAC
CATCCGCTCG CGGGCGCGCC GCTGCGGCGC GCCGACTATT TCGCCGCGCG GCACGTGACG
GTTTCGCCGC TCGGCGAGCC GCACACGCTC GACGTGCTGC TCGGCGCCGA CGGACGCTTC
CGGCAGATCC AGCTCGTCTG TCAGCACTAC TTCGCCGCAT GCCAGATCGC GGCGTCGGGC
GACCTGCTGC TGACGCTGCC GCGTTCGTAC GCGCAGCGTA TGACGCGGCT CCTGCCGATC
GCGGTGCAGC CGCTGCCGCT GCGGCTGAAG CCCTATCCGA TCCTCGCGTA CTGGCACGAA
TCGCGCGAGC TCGACCGAGC GCACCAGTGG TTCCGGCAGC GCGTGATCGA CGTCGTGCGC
GCCGCGTCGT CGCATCCCGC CGGCGCGTAG
|
|---|
| Protein sequence | MGLRERAGRA DKPIPRNTGT PMQHDHRLDL NLFRVLDAVY VQGGISAAAR ALHLTQPAVT
HALNRLRAHF GDPLFVRQGN KVVPTERTRA VIADVQLHLK GLQDAARAQT RFSAQALDMS
FVVGVRDVLE SIALPQLVET LARDAPGVRL VSRRVPVADI ERELGSGNLD LAIERRVPAG
PRMAAEYVVD DTLVVAMRRD HPLAGAPLRR ADYFAARHVT VSPLGEPHTL DVLLGADGRF
RQIQLVCQHY FAACQIAASG DLLLTLPRSY AQRMTRLLPI AVQPLPLRLK PYPILAYWHE
SRELDRAHQW FRQRVIDVVR AASSHPAGA
|
|---|
| |