| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0438 |
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| Symbol | |
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| ID | 3846755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 523393 |
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| End bp | 526446 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637837743 |
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| Product | RND efflux system, cytoplasmic membrane extrusion protein |
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| Protein accession | YP_438638 |
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| Protein GI | 83717325 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTGCGC GTCGACCCGG GCAAGCCGTG GCCCGCGCAA CTGATGGTCA AGGTTCCGCA
GTGAGCGCGC CGAGCGTCGT TCGTTTCTCG GACGTCAGCC TGCGCTATGG CAAGACCGTC
GCGCTCGACC GCATCACGCT CGACGTCCCG GCCGGTCTCA CGATCGGGCT GATCGGCCCG
GACGGCGTCG GCAAGTCGAG CCTGCTCGCG CTCGCGTCCG GCGCGCGCGC CCTGCAAACG
GGCAGCGTCG ACGCGCTCGG CGGCGACATG CGCTCGCGCC GCCATCGCGA GCGCGTGTGC
CGGCGCATCG CATACATGCC GCAGGGGCTC GGCAAGAACC TGTATCCGAC GCTCTCCGTC
GAGGAGAACC TGCAGTTCTT CGCGCGCCTG TTCGGCCACG ACGCGGGCGA GCGCCGCCGC
CGCATCGACG CGCTCACGCG CAGCACCGGC CTCTTTCCGT TCCTGTCGCG GCCGGCGGGC
AAGCTCTCGG GCGGGATGAA GCAGAAGCTC GGCCTGTGCT GCGCGCTGAT CCACGATCCC
GATCTGCTGA TCCTCGACGA GCCGACGACG GGCGTCGATC CGCTCGCGCG CGCGCAGTTC
TGGGATTTGA TCGCCCGCAT TCGCGACGAG CGGCCGGCGA TGAGCGTGAT CGTCGCGACC
GCGTACATGG ACGAGGCGCA GCGCTTCGAC TGGCTGATCG CGATGAACGC GGGCCGCGTG
CTCGCCACCG GCGCGCCTGT CGAGCTGCTC GCGCGCACCG GCTGCGATTC GCTCGAAGCG
GCGTTCATCG CGCTGCTGCC CGAGGAGGCG CGGCGCGACC ACAAGCCGGT GGAAATCGAG
CCGCTGCGCG CCGACTCGCA GGCGGGCACC GCGATCGAGG CGCGCGGCCT GACCATGCGC
TTCGGCGATT TCACCGCGGT CGATCACGTG AGCTTCCGAA TCCGGCGCGG CGAGATTTTC
GGCTTTCTCG GCTCGAACGG CTGCGGGAAG TCGACGACGA TGAAGATGCT CACGGGCCTG
TTGCCCGCGA CCGAAGGCAC CGCGCAGCTG TTCGGCAAGG AGGTCGACCC GAAGGACATC
AACACGCGCC GGCGCGTCGG CTACATGTCG CAAGCCTTCT CGCTGTATAG CGAACTGACG
GTGCGGCAGA ACCTCGTGCT GCATGCGCGG CTGTTCGGCG TGCCGGCCGC CGAGATCGAC
GCGCGCGTCG ACGAAATGGC GCGCCGCTTC GGCCTCGCCG ACATCTACGA CGTGCTGCCC
GACAGCCTGC CGCTCGGCAT GCGGCAGCGG CTGTCGCTCG CGGTCGCGAT GGTGCACAAG
CCCGAGTTGC TGATCCTCGA CGAGCCGACG TCGGGCGTCG ATCCGGTCGC GCGCGACAGC
TTCTGGCAGT TGATGATCGA CCTCGCGCGC CGCGATCTGG TGACGATCTT CATCTCGACG
CACTTCATGA ACGAGGCGCA GCGCTGCGAC CGGATCTCGC TGATGCACGC GGGGCGCGTG
CTCGCGAGCG ATTCGCCGGC GGAACTCGTG CGCGCGCGCG GCGCGGCGAC GCTCGAAGAC
GCGTTCATCG GCTATCTCGT CGATGCGTCG GCGAAGGAGG CGGATGGCGG CACGGGCGCC
GGCGCGGCTC ACCGCGCGGC GGGCAGCGCC CCCGCCGGCC GCGACGCGAC AGGCGGCGCC
GACGACGCCG CGCGCGCGCG CGGCGTCGCG CAAGCGAACG GCGCGGCCGG ACGCCGGACG
ATCGAAGCGC CCGCGGCGGG CCCGAGCGCC GAAGTCGAGG TCGAACCGGT CGCGAACGCG
CGGCCCGCAG CGGGCGTCGA TACCCGAACC GCCGCCGCCT CGCGTTCCGA ACCGCAGGCG
CCGCCCGCCT CCGCCGCGCC CGCCTCCGCG CCGCAGCCGC CCGCTGCGTC CACCGAGCCG
CCCCGTCGCG CATTCAGCGC GCAGCGCGCG CTCAGCTACA TGTGGCGCGA GATGCTCGAA
CTGCGCCGCG ATCCGGTTCG CGCGACGCTC GCGCTGATCG GCTCGCTCGT GCTGATGTGC
GTCATCGGCA TCGGCATCAG CCTCGACGTC GAGGATCTGA CCTACGCGGT GCTCGACCGC
GACCAGACCG AGCTGAGCCA CGACTACGCG CTGAACCTGT CCGGCTCGCG CTACTTCGTC
GAGCGGCCGC CGATCTCGGA TTACGCGCAG CTGGACCGCC GGATGCGCGA CGGCGAGCTG
TCGCTCGCGA TCGAGATTCC GCCGAACTTC GCACGCGACG TCGAGCGCGG CGCGCCCGTG
CAGATCGGCA TGTGGATCGA CGGCGCGATG CCGCAGCGCG CGGAGACGAT CCGCGGCTAC
GCGATCGGCA TGCACACGAT GTGGCTCGCC GACAAGGCGC GGCACCGCCT CGGCGTGACG
CTCGCGCCGC GCGCGGAGAT CGTCACGCGC TACCGCTACA ACCCGGACGT GAAGAGCCTG
CCGGCGATGA TTCCCGCCGT GATGCCGCTG CTGCTGCTGA TGCTGCCCGC GATGCTGACG
GCGCTCGCCG TCGTGCGCGA GCGCGAGCTC GGCTCGATCC TGAACCTGTA CGTGACGCCC
GTCACGCGCA CCGAATTCCT GATCGGCAAG CAGGTGCCGT ACGTCGTGCT CGCGATGCTG
AACTTCCTGC TGATGACGGT GCTCGCGCGA ATCGCGTTCG ACGTGCCCGT CAAGGGCAGC
TTCATGACAC TGCTGCTCGC GGTGCTGATC TTCAACGTCG TCGCCACCGG CATCGGTCTG
CTCGCGTCGA CGTTCACGCG CAGCCAGGTC GCGGCGATCG TGATGACGAT CATCGGCACG
ATGATTCCGA CCGTGCAGTT CGCGGGGCTG CTCACGCCGC TGTCGTCGCT CGAAGGCACC
GGGCGCTTCA TCGGCCTCGT CTATCCGGCC ACCTACATGC TGTCGATCAG CCGCGGCGTG
TTCAACAAGG CGCTGTCGCT CCACGATCTC TACTCGCAGT TCTGGCCGCT CGCCGCCTCG
GTGCCGGTGA TCCTCGGCGC GACCATACTG CTCTTGAAAA AACAGGAACG CTGA
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| Protein sequence | MGARRPGQAV ARATDGQGSA VSAPSVVRFS DVSLRYGKTV ALDRITLDVP AGLTIGLIGP
DGVGKSSLLA LASGARALQT GSVDALGGDM RSRRHRERVC RRIAYMPQGL GKNLYPTLSV
EENLQFFARL FGHDAGERRR RIDALTRSTG LFPFLSRPAG KLSGGMKQKL GLCCALIHDP
DLLILDEPTT GVDPLARAQF WDLIARIRDE RPAMSVIVAT AYMDEAQRFD WLIAMNAGRV
LATGAPVELL ARTGCDSLEA AFIALLPEEA RRDHKPVEIE PLRADSQAGT AIEARGLTMR
FGDFTAVDHV SFRIRRGEIF GFLGSNGCGK STTMKMLTGL LPATEGTAQL FGKEVDPKDI
NTRRRVGYMS QAFSLYSELT VRQNLVLHAR LFGVPAAEID ARVDEMARRF GLADIYDVLP
DSLPLGMRQR LSLAVAMVHK PELLILDEPT SGVDPVARDS FWQLMIDLAR RDLVTIFIST
HFMNEAQRCD RISLMHAGRV LASDSPAELV RARGAATLED AFIGYLVDAS AKEADGGTGA
GAAHRAAGSA PAGRDATGGA DDAARARGVA QANGAAGRRT IEAPAAGPSA EVEVEPVANA
RPAAGVDTRT AAASRSEPQA PPASAAPASA PQPPAASTEP PRRAFSAQRA LSYMWREMLE
LRRDPVRATL ALIGSLVLMC VIGIGISLDV EDLTYAVLDR DQTELSHDYA LNLSGSRYFV
ERPPISDYAQ LDRRMRDGEL SLAIEIPPNF ARDVERGAPV QIGMWIDGAM PQRAETIRGY
AIGMHTMWLA DKARHRLGVT LAPRAEIVTR YRYNPDVKSL PAMIPAVMPL LLLMLPAMLT
ALAVVREREL GSILNLYVTP VTRTEFLIGK QVPYVVLAML NFLLMTVLAR IAFDVPVKGS
FMTLLLAVLI FNVVATGIGL LASTFTRSQV AAIVMTIIGT MIPTVQFAGL LTPLSSLEGT
GRFIGLVYPA TYMLSISRGV FNKALSLHDL YSQFWPLAAS VPVILGATIL LLKKQER
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