Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0311 |
Symbol | |
ID | 3844688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 380699 |
End bp | 382120 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637837616 |
Product | sphingosine-1-phosphate lyase |
Protein accession | YP_438512 |
Protein GI | 83718034 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0935746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCG AAGAAGGCAT CAAGCGGCTC TATCCGTATG CAACGGAATT CGGCGCGATG CACGGATTTC CGGAACATGG GTTGTCGCGC GAGCGCTTGC TCGACGAGCT TCGGTCGATG GCCGTGCGAG AAGATCGCAA GTGGGAGAGC GGCCGCTGCT CGGGCACGAT GTATTGCGGT GACCACGAAC ATTATGCGTT CCTTAACGAA GCGTACGGGC TTTTCAGCCA CGTGAACGCG CTGCAGCGCG ACCTGTGTCC GAGCATGAGC CGGATGGAAA GCGAGATCGT CGGCATGACG GTGGCCATGC TGCACGGCGA AGCCGTGGCC GGGCACGGCG GCGCGCATCG CGCATGCGGC GTGCTGAGCC TCGGCGGCAC CGAGAGCATT CTGAATGCGA CACTCGCGTA TCGCGAGAAA GCGCGCGCCG AGCGCGGCAT CGATCGGCCG CGGATGATCT GGCCGGCGTC CGCGCATCCC GCGTTTCGCA AGGCCGCGCA TCTGTTCGGC TTCGATGTGA CCGTCGCGCC GGTCGATCCG GACACGATGC AGGTCGACGC CGATTTCGTG CGCGATGCGA TCGACGCGAA TACGGTGATG CTCGTGGGCT CGGCGTGCAA TTACCCGTAC GGCACCGTCG ATCCGATCGA GGCGCTGTCG GAGATCGCGG TCGAAAAGGA GGTGTGGCTG CACGTGGACG GCTGTCTGGG CGGCTGGATG CTGCCGTGGG GCGAGGAGCT GGGTTATCCG AACATTCCGG CATTCGATTT TCGCCTGCCT GGCGTCACGT CGATCTCGGC GGATACGCAC AAGTTCGGCT ACGGCCCGAA GGGCGGCTCG GTGCTCGCGT GGCGCGACGC GAGCTTTCGG CGCTATCAGT ATTTTTTGAT GACCGATTGG GTGGGCGGCG TCTACGGCTC ACCTGGCCTG GCCGGCAGCC GCTCGGGCGG CCTGATCGCC GCGACGTGGG CGGCGCTGCG CGGCCTCGGG CGCGAAGGCT ACCGTGCACG CGCAAGGGCG ATTTTCGATA CGGCGTTCGA CATGCAGGCC GCGGTTCGCG CGATTCCGGA ACTGCGCGTG CTCGGCAAGC CGACGTTCTG CTTCGCGTTC GCGTCGGACG CGTTCGACAT CTATCACGTG AACGATTTCA TGCGTCGACA AGGCTGGCGC TTCAACGGGC TTCAGCATCC AGACGCGCTG CACATGTGCG TGACGGGGCC GCAGACGCAG CCGGGCGTCG CCAAGCGGTT CCGGCAGGAT CTCGGCGCGG CGGTTGACTA CGCGCGACGT CACACGCATG CGCGCGCGCA ATCGAGCGGC GTTTATGGCG GCGATTCGGC GGGGCTCGAT TTGCGCGACG ACGCGCAGGC GAGGGCGTTC TTCACGCAGG TGCTCGATTT GTTTACCGAC TGTCCGCTTT AG
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Protein sequence | MDLEEGIKRL YPYATEFGAM HGFPEHGLSR ERLLDELRSM AVREDRKWES GRCSGTMYCG DHEHYAFLNE AYGLFSHVNA LQRDLCPSMS RMESEIVGMT VAMLHGEAVA GHGGAHRACG VLSLGGTESI LNATLAYREK ARAERGIDRP RMIWPASAHP AFRKAAHLFG FDVTVAPVDP DTMQVDADFV RDAIDANTVM LVGSACNYPY GTVDPIEALS EIAVEKEVWL HVDGCLGGWM LPWGEELGYP NIPAFDFRLP GVTSISADTH KFGYGPKGGS VLAWRDASFR RYQYFLMTDW VGGVYGSPGL AGSRSGGLIA ATWAALRGLG REGYRARARA IFDTAFDMQA AVRAIPELRV LGKPTFCFAF ASDAFDIYHV NDFMRRQGWR FNGLQHPDAL HMCVTGPQTQ PGVAKRFRQD LGAAVDYARR HTHARAQSSG VYGGDSAGLD LRDDAQARAF FTQVLDLFTD CPL
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