| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0267 |
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| Symbol | |
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| ID | 3845192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 329863 |
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| End bp | 334482 |
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| Gene Length | 4620 bp |
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| Protein Length | 1539 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637837573 |
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| Product | rhsD protein |
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| Protein accession | YP_438469 |
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| Protein GI | 83716862 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTGC CGGCCGTCAA GCACATGGAC CCCGTCGTCG GGATCGACGT GCATTCGGTA
ATCGTCACGC CGGGGCTGCC GCCGGTGTTT CTGCCGCATC CGCATGTCGG CTTCATGCTC
GATCTGCGCG AATACGTCGA GGCCGCGAAG GGCGTGATCG GCAGCATTGC GATGACGATC
GCCGAAGAGG CGGTGCAGGA CTACCTGAAG GATCACCCCG ACGACAGCAA GAAACTGACC
GATGCGCTCA ATTCGCTCGA CAACCAAAAG AAGCAGGCCG AGCGCGATCC GATGGTCGCG
GAGATGCTGA GGCTCAATCG CGACGTGTCG TCGATCAGGG GCGACGTGGC GAACGCGGTG
GGCGCGGGCG TCGGGATGGG GGGCGCAGCC GGCCGGCCGA TTTTCGTGAA CGGGCTGATG
CGCGCGACGG CGGGTACGCA TTCGTTTCAC GTGCCGGGCT TGCACTTCCC GCTGGGCGAA
ACGTTCGCGC CGCCCGATCC GCTGCCGTCC GACGACGCCG AATCGTACAT GGGCAGCCGC
ACCGTACTGG CGAACAACGA TCCGATGTCG TTCCTCGCGC TGCCCGCGAT GAGCTGCTGG
GCCGAGGGGA TCGAGCCGCC GCCGCACAAC GGCGCGCATA CGGCGCGCAC GCATGTGTCG
ATGCCGAGTT CGGTGATGCT GCCGATTCCC GCCGGGCGAC CGGTGCTCGT CGGTGGGCCG
CCCGTGATGA ACATGGCGGC GGCCGCGAAG GGGATGTTCA AGGCGTTTCA GGGATCGAAG
TGGGCGAAGA AGCTCGCGGA CAAGCTGCAT CTGAAGTCTG GGTTCCTGCG ATGCGCGGTG
CTGAAGGCGG AGCCGGTGGA CGTGACGACG GGCGAAGTGG TCGTGCAGCA GAACGACTTC
ACCGTCTCCG GCCGGTTGCC GCTCGTGTGG GATCGATACT ACGCGAGTCA CGATCGCCAT
GCAGGCGCGG TGGGCTTCGG CTGGCAGACG CCCGCCGATA TCCGGCTCGA GCTGATGCGC
AACGAAGATG GCATCGGCGC GGCTGCTTGT TTCCCCGATC ATGCGACCGC CTTCGACATG
GTGCCGGCAG ACGATGGTTG GCCGGCGCGC ACGTATGACT GGCAGCATGG GCACGCGCTG
TATCGCGACG ATGGGCGGAT GGTGCTGCGC ACGCGCGAGG GCATCGAATA CGGATTCGTG
CTGCCTTCCC GTTGGCGAAA TGCCGTCGCG GCGCTCGATG GCGACGATTC GCGACTCACG
CTGCCGATCG GCCGCATGGC CGATCTCAAC GGCAACGCGT GGGTGTTCGA GCGTGACGTG
TATGGCGGGC TCGTGCGTCT CGTCGAATGG AAGCGCGACG GGCGGACCGA GCGCGTGGTC
GAGTGCGGCA CGGGCAGCGG GCTGCACGCC GGGCTGTTGA CATCGCTGAC GCTGATCGAC
GCAGGCGGAA ACGCGCATCC GCTCGTGAGC TACGAGCATG ACCGCGAGCG CAATCTGGCG
GCGGCGATCG ACGCGATGGC GCATCCGCAT CATTTCGAAT ATGCGGCCGG GCATCGGATG
GTGAGCCACA CGAGTGCGCG CGGCGTGTCG TTCCGCTACA GCTACCAGCA GGGCGACGAC
GGCGTGTGGC GCGTCGATCA TGCGTGGGGC GATAACGGGC TGTTCGACTA TCGTTTCGTC
TACGATCGCG CGCGGATGGA AACGCGCGTC ACCAATTCGC TCGGGCATAC GACGATCACG
CAGATGAACG AGCGCGGGAT GCCTGTTGCG GAAATCGATT CGCTAGGCGG CGTGACCGGG
TATCGGTATG ACACGCAGGG GCGTGCGAGT GCGGTGATTG ATACGGCGGG GCGGACGACG
GCGTGGGAAT ACGACGCGTA CGGCAGTTTG GTTGCGCAGA CGTTGCCGGA TGGCAGTGTA
GTGCGCGCGG AGTATGACGC CGACGGCCGG CCCGTTTGTA TCACGATGCC TACCGCGCGG
CAACTGCGCT ACGAGTGGGA CGAGCACGGT CATTTGCGCT CACGCACTAC GTCTTCCCGG
GCTGTTTCGA GATACGTGTA CGACGCATAC GGGCAACTCG TTTCGTACAG CGGATCGCGT
GGTGCGATCA CGCGATTCGA GTACGATCGC GACGGAAATC TGGCGACCGT TACAGATGCC
TTGGGGAATC GTACGCGATA TGTGCGCGAC GCGCGTGGAA GAGTCGTTTG GATGGCCGAC
CCGCGCGGGC AGGTAGGGCT TTACGAATAT GACGGCAACG GCAATTTGAC GAGAGCGGTC
TTGCCTGGTG GGAAAGAGAT TCGTTGCGAG TTCGATGACG ACGGAAACCT GGTTCATTAT
CGCGACGCCG CCGGCCAATC GACAACGTTG GCGTATTCGC CGATCGGGTT GGTGGAACGC
AGAATCGCGC CGAGCGGCGG CATTGTCGAT TGCCGTTACG ATACGGAGGG GCAACTGGTC
GGCGTCGTCA ACGAACGTGG CGAGCAGTAT GCGCTTAAAC GCGACCCGCT AGGCCGGATC
GTGTCCGAGT CGGACTATTG GGGGCAGACA TGGCACTATC GATACGGTGG CTCAGGCGAA
TTGCTGTGTA GCACCGATCC GCTCGGGCGG GTGGTCGAGT ATCAGTACGA TCGATGCGGC
CGGATCGTGG AGAAGCTTGC GCGGGCCTCT GCGGATGACG CATTTGTCCA GGTCCATCGC
TTCACCTATG ACCAGTGTGG CAATCTGATA CTCGCCGAGA ACGACGATAG CCGGGTCGAG
TTTTGCCATG ATGCGGATGG ACGAGTGATT GAAGAAAAAC AAGGCGACGA CTTTACGATC
AACAACGTCT TCGATGCGGC CGGCAATCGC ATCGAGCGTC GGACCAGGCT TCTATCGGAA
GGCGCGCTCA TCGAACATGT CGTTCACTAT GAGTATGACG TCTTGAACGC CGTGGTTTCG
ATTCGGATAG ACGGCTCGGC GGCGGTCGTC ATAGAACGCG ATGATCTTGG CCAGGCCGTC
TCAGAGCGAC TGGGCCCTGC GCTGAGACGA GCGTTTTCAT ACGAGGCGGG CGGGCAGCTT
GCCGTTCAGA CGCTGTTTGC ATCAACCGGC ACGATGTTCG CAAGCGAGTA TGCATACGAC
CCGAACGGCG AGGTGATCGA AAAGCGCGAT GAGCGCGGGC GCATGGAGCG CTTCGAATAT
GATTCCGTGG GACGCGTGGT TTCGCACCTC GGCGCTCGCG GCATCGTGCG CCGGCTCGCC
TATGATTTGG CTGGGGATCT GTTGCGAACA CGTGTTTCCG GATATGACGC GGCGGCCCTT
ACCGACGCGG AAAAAGCCGC GAACTGGATT CGCGACGGCG AATATGAAGG TTGCTACTGT
GCGTTCGACC GTGCGGGCAA TATGGTTCAC CGTCGAGATG CCGAGCAGAA TCTGGCCTTG
CGCTGGGATC CGGCGGGCCA ACTGCGCGAG ACGATAGCAT TGCGTCCGGC AACGGCTGAT
GTGGCGTCCG CTCGGAAGCG TACTCGCACA CAGTACGAAT ACGATGCATT GCGGCGGCGA
ACACGCAAGC TGGTGCAAAT CGAATCGGAA GGCGAGCCGG ATTCGGTGTT CTCGTACGTC
AGTTGCTTCT TCTGGGATGG CGATGCGCTC GTGGGAGAGC GTACGACAGG CGGCTGGGTG
GGGCGCGCGG GCCGCGCAGA GGAAGACGAG CGGGACGCAA CATCGCTCGC GCCGCCGTCT
CCAGCCGGCT CGAAGAACGG CAACTGGCTG ACGTTACAAC CCGATCACGT ATGTGAGTGG
TTCTATTACC CGCGAACATT TCACCCGCTC GGAGTCGTGC ACTGCTATGC CGGCGAGAAG
CGCGAGCTCG CGAGGGCGAC GGTTGGCTCG CCTTCGAAGG CGGATGCAAC TTACTTTTAC
CAAAGCGATC CGAACGGCGC GCCGGTGCGA ATGCTCGATG TGGAGGGAAA CGTGGCTTGG
GAGGCGAGCT ACGACGCCAA TGGAGGCATC GAGCAATTTG GCATTCAGGC GATGCCGCAG
CCGCTTCGAT TGCAAGGGCA GTACTTCGAT GCCGAGACGG GCATGAGTTA CAACCGACAT
CGTTACTACG ATGCACGGAT CGGCCAGTTC GTCAGCGAAG ACCCTATCCG TCTGAGCGGT
GGAGAGAACT TGTACCGCTA TTGCGTCAAC AGCATATCGT GGGCGGATCC TCTCGGACTC
GATAGAGTTC CTTTGTTCGA TCCGAACAAT CGGTTGTCTT TCAATGCGAT CTGGGCATAT
ACAGGCAATC TGCCCACTCC GTCCGACGTC ACGGTCGTTC GGCCGGCGAC AAGTTGGGGA
AGGAATTCGG GGGTTCTAAA ATGGCAGGAT CATTATTATG TTTTTGCAAG CGCTGGTAAG
AAATCGCATT CCGAGGACGC GATCATTGAC TTTATAAAAC AGCACGATAT CAAGCCGAGC
GAGATTCAAG GTTTGTATAG CATACTCAGC CCGTGCGCCG AAGAGAAGAA ATCCTGTCTT
GAAAAGACCA AAGGCGAAGG GCTGGAATTT GATTGGAGTT TATTTCACCA GACCGACAAC
GTAGGTTCGG AAGTCAGGAA GGAGATCGGT GCGCTGATTA AGAATATGAA GGGGGTGTGA
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| Protein sequence | MALPAVKHMD PVVGIDVHSV IVTPGLPPVF LPHPHVGFML DLREYVEAAK GVIGSIAMTI
AEEAVQDYLK DHPDDSKKLT DALNSLDNQK KQAERDPMVA EMLRLNRDVS SIRGDVANAV
GAGVGMGGAA GRPIFVNGLM RATAGTHSFH VPGLHFPLGE TFAPPDPLPS DDAESYMGSR
TVLANNDPMS FLALPAMSCW AEGIEPPPHN GAHTARTHVS MPSSVMLPIP AGRPVLVGGP
PVMNMAAAAK GMFKAFQGSK WAKKLADKLH LKSGFLRCAV LKAEPVDVTT GEVVVQQNDF
TVSGRLPLVW DRYYASHDRH AGAVGFGWQT PADIRLELMR NEDGIGAAAC FPDHATAFDM
VPADDGWPAR TYDWQHGHAL YRDDGRMVLR TREGIEYGFV LPSRWRNAVA ALDGDDSRLT
LPIGRMADLN GNAWVFERDV YGGLVRLVEW KRDGRTERVV ECGTGSGLHA GLLTSLTLID
AGGNAHPLVS YEHDRERNLA AAIDAMAHPH HFEYAAGHRM VSHTSARGVS FRYSYQQGDD
GVWRVDHAWG DNGLFDYRFV YDRARMETRV TNSLGHTTIT QMNERGMPVA EIDSLGGVTG
YRYDTQGRAS AVIDTAGRTT AWEYDAYGSL VAQTLPDGSV VRAEYDADGR PVCITMPTAR
QLRYEWDEHG HLRSRTTSSR AVSRYVYDAY GQLVSYSGSR GAITRFEYDR DGNLATVTDA
LGNRTRYVRD ARGRVVWMAD PRGQVGLYEY DGNGNLTRAV LPGGKEIRCE FDDDGNLVHY
RDAAGQSTTL AYSPIGLVER RIAPSGGIVD CRYDTEGQLV GVVNERGEQY ALKRDPLGRI
VSESDYWGQT WHYRYGGSGE LLCSTDPLGR VVEYQYDRCG RIVEKLARAS ADDAFVQVHR
FTYDQCGNLI LAENDDSRVE FCHDADGRVI EEKQGDDFTI NNVFDAAGNR IERRTRLLSE
GALIEHVVHY EYDVLNAVVS IRIDGSAAVV IERDDLGQAV SERLGPALRR AFSYEAGGQL
AVQTLFASTG TMFASEYAYD PNGEVIEKRD ERGRMERFEY DSVGRVVSHL GARGIVRRLA
YDLAGDLLRT RVSGYDAAAL TDAEKAANWI RDGEYEGCYC AFDRAGNMVH RRDAEQNLAL
RWDPAGQLRE TIALRPATAD VASARKRTRT QYEYDALRRR TRKLVQIESE GEPDSVFSYV
SCFFWDGDAL VGERTTGGWV GRAGRAEEDE RDATSLAPPS PAGSKNGNWL TLQPDHVCEW
FYYPRTFHPL GVVHCYAGEK RELARATVGS PSKADATYFY QSDPNGAPVR MLDVEGNVAW
EASYDANGGI EQFGIQAMPQ PLRLQGQYFD AETGMSYNRH RYYDARIGQF VSEDPIRLSG
GENLYRYCVN SISWADPLGL DRVPLFDPNN RLSFNAIWAY TGNLPTPSDV TVVRPATSWG
RNSGVLKWQD HYYVFASAGK KSHSEDAIID FIKQHDIKPS EIQGLYSILS PCAEEKKSCL
EKTKGEGLEF DWSLFHQTDN VGSEVRKEIG ALIKNMKGV
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