Gene BTH_II0262 details

Gene Information

• Locus tag: BTH_II0262
• ID: 3846621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 320537
• End bp: 322408
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637837568
• Product: hypothetical protein
• Protein accession: YP_438464
• Protein GI: 83717522
• COG category: [S] Function unknown
• COG ID: [COG3519] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03359] type VI secretion protein, VC_A0110 family

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACACGC GCCTGCTCGA CTACTACAAC CGCGAGCTCG CGTACCTGCG CGAGTTGGGC 
GGCGAGTTCG CGCAGCAGTT TCCGAAAGTG GCCGCGCGCC TGCGGATGCA CGAATCGGGG 
CCGCCCGATC CGTACGTCGA GCGGCTGCTT GAAGGCTTCA GCTTCCTCAC CGCGCGCGTG 
CAGCTGAAGA TGGATGCGGA GTTTCCGCGC TTCACGCAGG CGCTGCTCGA CGCCGTTTAT 
CCGGGCTACG TCGCGCCGGT TCCGTCGATG GCGATCATGC AGTTCACGCC GATGATGAAC 
GAAGGCAGTC TCGCGCAAGG CTACCGGCTG CCGGCCGGCA CCGCGCTGCG CGCGCGGCCG 
GCCGCGTCCG AGCAGACCGC GTGCGAGTTT CGCACCGCGC ACGATTTGAC GCTGTGGCCG 
CTGGAACTCA CGGCCGCGTC GGTGACGGGC GCGCCCGCGT ACCTGCCGCG CTCGGCGACG 
GCCGCGCGGC GCGACGTGCG CGGCGCGCTG CGCATCCGCC TGAAGGCGTG CGGCGGCGCG 
AGCCTCGCGA AACTGCCGAT CGAGCGCCTG ATGTTCCATC TCGCCGGACC CGAGCGCGAC 
GCGCTGCATC TGCTCGAACT GATCGCCGGG CATACGATCG GCGTCGTGTG CCACGACGCG 
GCGCAGCCGC CGCGCTGGCT GCACGCGCTC GGCGCGGACG CGCTCGCCCA TCAGGGCTTC 
GACGCCGCCC AGGCGCTGCT GCCAGACGAC GGCCGCAGCT TCCAAGGCTA TCGCCTGCTG 
CGCGAGTATT TCGCGTTTCC CGCGCGCTTC CTGTTCTTCA GCATCGAGGG ATTGCGGCCC 
GCGCTCGCGC GCGCGACGGG CGACACGTTC GAGCTGACGC TGCTGCTCGA CCGGCACGAC 
GCGGCGCTCG AGAACAGCGT CGATGCGCGG CACGTCGCGT TGAACTGCAC GCCGGCCGTC 
AATCTGTTCG CGCGTCGCGG AGACCGCATT CCGGTCCATC CGGGCGCGCG CGAGCATCAT 
GTCGTCGTCG ATCGCAGCCG GCCGCTCGAC TACGAGGTCT ATGCGGTGCG GCGGCTCGCG 
GGCGAGCCGC GCGACGACGC CCAGGCGCGC GAGTTCCGGC CGTTCCACGC GTCGTTCGCG 
GGCGACGACG GCAATTACGG CGCGTACTAC ACGGTGCGCC GCGAGCCGCG GCTCGTATCC 
GCGCGCGCGC GCGCGAACGG CACGCGCACG GGCTACGTCG GCAGCGAGAC GTTCGTGTCG 
CTCGTCGACA GCGAGTGCGC GCCGTACGAC GAATCGATCC GCTATCTGTC CGCCGACACG 
CTGTGCACGA ATCGCGATCT CGTGCTGCTG CTGCCGGCGG GCGACGCGAA CGCGTTCACG 
CTGCGCGTGT CGGCGCCCGT CGAGCGGATC GCCGCGATTC GCGGGCCGTC GCGGCCGCGC 
GCGCCGATCG CCGATGCGCA GACCGCGTGG CGGCTCGTGA GCCACCTCGG GCTCGCGCGC 
CAAACGCTGA CCGACGTCGA CGACGAAGAA GGCGCGCGCG TGCTGCGCGA ACTGCTCGGC 
CTGCATGCGG ACCCGGCCGA CGCGGCGATG CGCCGGCAGA TCGACGGCGT GCATCGCGTC 
GCGTTCACGC CGGTGTTTCG CAGGCTGCCC GCAGCCGGGC CGCTGATGTT CGGGCGCGGC 
GTGCAGGTGG ATGTGACCGT CGACGATCAT GCGTTTTCCG GCGACAGCCC GTATCTGCTC 
GGCGCGGTGC TCGAGCAGTT TTTCGCGCGG CACGTGTCGA TCAACTCGTT CGCCGAATGC 
GTGCTGAGCA GCGCGCAGCG CGGCAGGCTC GCGCAATGGC CGGCGCGCGT CGGCAGGCGG 
CCCGCGATAT GA 

 

Protein sequence

MDTRLLDYYN RELAYLRELG GEFAQQFPKV AARLRMHESG PPDPYVERLL EGFSFLTARV 
QLKMDAEFPR FTQALLDAVY PGYVAPVPSM AIMQFTPMMN EGSLAQGYRL PAGTALRARP 
AASEQTACEF RTAHDLTLWP LELTAASVTG APAYLPRSAT AARRDVRGAL RIRLKACGGA 
SLAKLPIERL MFHLAGPERD ALHLLELIAG HTIGVVCHDA AQPPRWLHAL GADALAHQGF 
DAAQALLPDD GRSFQGYRLL REYFAFPARF LFFSIEGLRP ALARATGDTF ELTLLLDRHD 
AALENSVDAR HVALNCTPAV NLFARRGDRI PVHPGAREHH VVVDRSRPLD YEVYAVRRLA 
GEPRDDAQAR EFRPFHASFA GDDGNYGAYY TVRREPRLVS ARARANGTRT GYVGSETFVS 
LVDSECAPYD ESIRYLSADT LCTNRDLVLL LPAGDANAFT LRVSAPVERI AAIRGPSRPR 
APIADAQTAW RLVSHLGLAR QTLTDVDDEE GARVLRELLG LHADPADAAM RRQIDGVHRV 
AFTPVFRRLP AAGPLMFGRG VQVDVTVDDH AFSGDSPYLL GAVLEQFFAR HVSINSFAEC 
VLSSAQRGRL AQWPARVGRR PAI