| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0247 |
|---|
| Symbol | |
|---|
| ID | 3844873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 300115 |
|---|
| End bp | 300819 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637837553 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_438449 |
|---|
| Protein GI | 83717769 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAG AAAAAGTCGC ATTGATCACG GCGGCGGGAA AGGGCATCGG CGCGGCGATC
GCGCGCGAGC TCGCGTCGGC CGGCTATCGT GTCGCGCTGA TGTCGCCGTC GGGCAGCGCG
GTCGCGCTCG CGGGCGAGCT GGGCGGCTTC GGGGTTCGCG GCTCGGTCGC CGACGAGGCC
GACCTCGACC GGCTCGTGCG CGAGACGCTC GCGCGCTACG GCCGCATCGA CGCGGTCGTC
AACAACACCG GCCATCCGCC GAAGGGCGAC CTGCTGTCGA TCGAGGACGC GAGCTGGCAC
GACGCGCTCG ATCTGGTGCT GCTGAACGTC GTTCGGCTGA TGCGCCGCGT GACGCCGGTC
TTCCAGGCGC AGGGCGGCGG CGCGGCCGTC AACATGTCGA GCTTCGCGGC CGTCGCGCCG
GAGCAGCCGA TGCCGGTGTC GTCGGTGCTG CGCGCGGCGC TCGGCGCGTG GACGCGCCTG
TACGCCGAGC GCTACGCGGC CGACAACATC CGGATGAACG CGGTGCTGCC GGGCTTCGTC
GACAGTTGGC CCGAGACGCC CGAGATCGTC GCGCGCATTC CAGCGGGGCG CTTCGGCAGG
ACGCAGGAGA TCGCGAAGAC CGTCGCGTTC CTGCTGTCGG ACGGCGCGGG GTATGTGACG
GGGCAGAGCA TTCGCGTCGA CGGCGGGATC GTGCGGGCGA TGTGA
|
|---|
| Protein sequence | MAGEKVALIT AAGKGIGAAI ARELASAGYR VALMSPSGSA VALAGELGGF GVRGSVADEA
DLDRLVRETL ARYGRIDAVV NNTGHPPKGD LLSIEDASWH DALDLVLLNV VRLMRRVTPV
FQAQGGGAAV NMSSFAAVAP EQPMPVSSVL RAALGAWTRL YAERYAADNI RMNAVLPGFV
DSWPETPEIV ARIPAGRFGR TQEIAKTVAF LLSDGAGYVT GQSIRVDGGI VRAM
|
|---|
| |