| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0215 |
|---|
| Symbol | |
|---|
| ID | 3845147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 257620 |
|---|
| End bp | 258768 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637837521 |
|---|
| Product | outer membrane porin OpcP |
|---|
| Protein accession | YP_438417 |
|---|
| Protein GI | 83716388 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC GCTGGGGGAT CGTCGCGCCG GCCGTCGTGC TGGCCGCGGC CGCGCATGCA
CAAAGCAGCG TGATGCTGTA CGGCAAGATC GAGGACGGCA TCAACTACAC GAGCAACGCG
CGCGGCCACG GTACCGTGCA ATTGCAGAGC GGCTACGACT ACGGCAGCCG CTGGGGACTG
AAGGGCACCG AGGATCTCGG CGGCGGCTAC AAGGCGATCT TCCAGCTCGA GAACGGCTTC
GACGTCAACA ACGGCAGGCT GGGCCAGGGC AATCGCGAAT TCGGCCGGCA GGCGTTCGTC
GGCATCGCGT CCGAGCGCTA CGGCACCCTG ACGTTCGGCC GCCAATACGA TCCGAGCGTC
GACATGTTCT CGCCGCTCAC CGCGAACGGC AACTGGACCG GCTACCTGTT CGCGCACCCG
TACGACAACG ACAACACCGA TTACTCGTTC CGCGTGAACA ACGCGGTCAA GTACGTGTCG
CCGACGTGGA ACGGCGTCAC GGCTGAAGGC ATGTACGCGG TCAGCAATCA GGCGGGCGGC
TTCGCGAACC ATCGCCTCTG CGGCGCGGCG CTGCAATACC GGCACGGCGG CCTGACGCTC
GGCGCGTCGT ACGTGAAGAT GAACAACGCG CGCAGCACGG ATGCGGCGGG CGCCGTCACG
GGCGACAACA CGTTCGACGC GTCGTCGCAG CAGAACATCG GCATCGGCGC GACCTACGAA
TTCTCGAATG CGCTGATCGG CTTCGCGTAT TCGCACGTCG ACGTCTACGA TCCCACCGCG
AACGCGTATT TCACCGGCAC GACGCAGCCC GCCGGCGGGC GCTGGAAATC GTGGAAGTTC
GACAACTTCG AGATCAACGG CCTCTATCAC GTGACGCCCG CGTTCTACGT CGGCGCGGCC
TACACCTATA CGCAGGCCCG CGTCGATTCG ACGGTCGGCG CGTTCAATCC GAAGTGGCAT
CAGTTGAGCA TGAAGCTCGA TTACGACCTG TCGAAGCGCT CGTCGGTGTT CGTCGAAGGC
GTCTACCAGC ACGCGATGAA CGCGCACACG GGCACCGATT TCGACTATGC GTACATCCCG
GGCGCGGCCG ACATCGCGTC GGGGCCGAAC CAGTACGTCG TGCGGCTCGC GCTGCTGCAC
CAGTTCTGA
|
|---|
| Protein sequence | MNKRWGIVAP AVVLAAAAHA QSSVMLYGKI EDGINYTSNA RGHGTVQLQS GYDYGSRWGL
KGTEDLGGGY KAIFQLENGF DVNNGRLGQG NREFGRQAFV GIASERYGTL TFGRQYDPSV
DMFSPLTANG NWTGYLFAHP YDNDNTDYSF RVNNAVKYVS PTWNGVTAEG MYAVSNQAGG
FANHRLCGAA LQYRHGGLTL GASYVKMNNA RSTDAAGAVT GDNTFDASSQ QNIGIGATYE
FSNALIGFAY SHVDVYDPTA NAYFTGTTQP AGGRWKSWKF DNFEINGLYH VTPAFYVGAA
YTYTQARVDS TVGAFNPKWH QLSMKLDYDL SKRSSVFVEG VYQHAMNAHT GTDFDYAYIP
GAADIASGPN QYVVRLALLH QF
|
|---|
| |