| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0208 |
|---|
| Symbol | |
|---|
| ID | 3846003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 244934 |
|---|
| End bp | 246322 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637837514 |
|---|
| Product | GGDEF domain-containing protein |
|---|
| Protein accession | YP_438410 |
|---|
| Protein GI | 83716280 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGCT TCCTCATTCA GCGCCCGTCT CGTCTGCAAA CGCTTGGGGC CGGAACATTC
GCGCTGCTGA CGCTGGCCGC GCTCGCGGCC ACCGCGCCGA ACGCGAATCT GACGCTCCCG
GCAATCGGGC CGTTCCTGCC GATGTCCGCG TTGACCGTGT TCAGCACCTC GCTCATCGCG
GCCTTCCTGC TCGGCGCGCA GTTCACCATC ATGCGCCGCC CGGTTCTCGG CACGCTCGCC
GGCACGTATG CGTTCGTCGC GACCACGGCC GCGCTTCAAC TGCTCGCGTA TCCGGGCGTC
TTTTCGACGA CCGGCCTGCT CGGCGCGCGG CGTTACAGCG CGGCATGGAT CTGGATGCTC
TGGCACGGCG GTTTCCCGCT GCTCGTCGTG CTCGCGATGC TGACGCGATA CCGGCTCGCG
AAGCGGCTCG ACCGCACCCG TCACGTCGGC CTCTGGCTGG CCGCATTAGC GGGCGCGCCG
GTCGCGGCCG GCATCGCGCT CGGGTTCGTC GCGCTGTATG TGGATCTGCC CAAGCCGTTC
ACGCCTTCGC TCGACAACAC GTTGCCCGCC GCCAATCCGG CGGCGATCGC CGTCTGGGCG
ATCAACCTCG GCGCGATCGT GGCCGCGCCG TTCATCGGAC GAATGAGAAC GATGCTCGAC
ATCTGGCTCG TCGTCGTACT GCTCGCCTGC TTCGCCGACA CCAGCCTGAA TCTGCTGAGC
ACGGCGCGCT TCAGCGCCGG CTGGTACGTC GCGCGGCTCT TCGGCATGTT CACGCCGGGC
ATCCTCGTTT GCGTGCTCGT CTGGGAGGTG ACGATGCTGT ACCGGCGGCT CTACGACGCG
CATGCGTCGC TCGTGCGGAC CGCCTCGCAC GACGCGCTGA CGATGGTGTA CAACCGCAGC
TATTTCAACG AGCAGTTCGA ACGCGCCTTC GACTACGTGC GCCGGCACAA CCTGCCGATC
GCGCTCGTGA TGGTCGACGT CGATCATTTC AAGCAGTACA ACGACACGTT CGGCCACCTG
CAAGGGGACA CGTGCCTCGC CGCCGTCGCG GCCGCGCTGT CCGGCGTGGC GAGCCGCGCG
GCCGATTTCG TCGCGCGCTA CGGCGGCGAG GAATTCGCCG TCGTGCTGCC CGGAACGGAC
GAACGCGGCG CGGCGGCGAT CGCCGAGCAG GCGCGGCAAT CCGTCGAGCG GCTGCGCATC
GCCGCCGATA CGTCGCCCGG CTACGTGACG GTCAGTGCCG GCTACGCGGC GACGAGCGGC
AATCCGTTCG AGACGCCCGG CGCGCTGGTC GCGGCCGCCG ACGCAGCGCT CTATCGCGCG
AAGATGCTGG GGCGCAACAT GAGCGCGGCG CCCCATCTCG ACGCGCCGGA TACGGCGACG
CACAGGTAA
|
|---|
| Protein sequence | MDGFLIQRPS RLQTLGAGTF ALLTLAALAA TAPNANLTLP AIGPFLPMSA LTVFSTSLIA
AFLLGAQFTI MRRPVLGTLA GTYAFVATTA ALQLLAYPGV FSTTGLLGAR RYSAAWIWML
WHGGFPLLVV LAMLTRYRLA KRLDRTRHVG LWLAALAGAP VAAGIALGFV ALYVDLPKPF
TPSLDNTLPA ANPAAIAVWA INLGAIVAAP FIGRMRTMLD IWLVVVLLAC FADTSLNLLS
TARFSAGWYV ARLFGMFTPG ILVCVLVWEV TMLYRRLYDA HASLVRTASH DALTMVYNRS
YFNEQFERAF DYVRRHNLPI ALVMVDVDHF KQYNDTFGHL QGDTCLAAVA AALSGVASRA
ADFVARYGGE EFAVVLPGTD ERGAAAIAEQ ARQSVERLRI AADTSPGYVT VSAGYAATSG
NPFETPGALV AAADAALYRA KMLGRNMSAA PHLDAPDTAT HR
|
|---|
| |