| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0197 |
|---|
| Symbol | |
|---|
| ID | 3845962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 228094 |
|---|
| End bp | 228861 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637837503 |
|---|
| Product | transcriptional regulator, putative |
|---|
| Protein accession | YP_438399 |
|---|
| Protein GI | 83716239 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ACCTGATAGA AGATCTCGTC ACGTTCGATG CGCATCTGAT GACGCTGACG
CATCTAGACC AAACCACCGA ACTCACCACC AACGAATCGG AATTGCTTCA AATGGTGCTC
GACGGGATGG CCACCAAGGC CGCCGTCATT CAGCAGGTAT GGGGCAGCAA GGGGCTCGTC
GTGACCGACA GCAGCTATCA CCAGCTCGTG CGCTCGGTGC GTAGCCGCCT CGAGGAACAC
GGCATCAGCG GCGCGCTCAT CAAGACGCTG CCTCGTCAAG GGTTGAAGTT CCTGGGTTCC
GCACAGGCGT TGACCGATGC GCCCGTCCCC GCCGCCGAGC GGGGTCTCGC CGATCTCGAC
GAGGCGGCAG ACGAAGCTTC TCGCGGGCCC CTCGCGCAGC ACGAACCGCC ATCCGCGCCG
CCCGCCGGCC GCGCACGGAA CTGGCGGCGC ACGCTTCGTT TCGTGGAGCG CGCGTTGCTC
GCCGGGCTCG TAGTCTGGGT TGGCCTCGTC ACCTGGAAGA TGATCTCGAT CAACGATCGC
TTTCCGTGGT TGACAGGGCA TTTCGGCATT CATACCCATG CTCACGTCTC CCCGCGCTCC
GCCGGGCTCA AGCTGCTTGC GTCGATCGGC GTACGCCCCG GCCCCGGAGA ACGCGTCTAT
GAGATATCCC GTAACGGCGA CAGATGGCTC GCGATATGCG CGGGAGCCAG ACACAGCAGC
GATGAGCGCT GCACCACCTA CTCCACCCGG GATCTGACGA CATCCTGA
|
|---|
| Protein sequence | MKKYLIEDLV TFDAHLMTLT HLDQTTELTT NESELLQMVL DGMATKAAVI QQVWGSKGLV
VTDSSYHQLV RSVRSRLEEH GISGALIKTL PRQGLKFLGS AQALTDAPVP AAERGLADLD
EAADEASRGP LAQHEPPSAP PAGRARNWRR TLRFVERALL AGLVVWVGLV TWKMISINDR
FPWLTGHFGI HTHAHVSPRS AGLKLLASIG VRPGPGERVY EISRNGDRWL AICAGARHSS
DERCTTYSTR DLTTS
|
|---|
| |