Gene BTH_II0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0143 
Symbol 
ID3846165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp176147 
End bp176944 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content61% 
IMG OID637837449 
Producttranscription regulator 
Protein accessionYP_438345 
Protein GI83717007 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCATA CTTCGCGCCA ATCGCAAGGA CGAGCAACGC CATCGCATAG CATGCCCCAC 
GAAAAGCTTC CCACACCCAG GGCCCGCGAG CAGTTGAGTG TCATCATGCT TGATGATCAC
GAGGTCGTAC TGAGTGGTAT CACCTATCAA CTGAAGCGGG AGCGCGACAT CGCCGTACTG
GGCACATTCT CCAGGTCGCG TCAGTTATTC GACTATCTGG CGCAGCATGG GCCCGCATTG
GCGCATACTC GGCCCGTCCT CCTTATCGAC TACGCGCTTG GGCCGCAGGA CACGGACGGC
ATCGCGCTGA TTCGGCGCCT GTGCGTCCAG TTCCCTGTTT GCCCGATCCT CGTCGTGTCG
GGGCACCTTC AGCCGTCGAT CGTCAGATTG GCGTTGATGG CAGGCGCACG CGGCTATATC
GGGAAGGACT GCACGCTGGA GGAACTCGTG GATGCGATCC GGCGGGTGGC ATCCGGTGAA
AAGTACGTGC ATCCGTCGCT TGCGGAACGC GATGACCTGG TGCCGCCTGC CGCGATCGAA
ATGAGACGGG GAGATACGGG CCGCGCGACG CTTGCGTCGC TGCTGTCGCC GCGCGAACTG
GAGGTGTTGA GACTGACTCT GCAGGGTTTC GAAGTCGGTC AGATTGCCGA GAAGCTGAGC
CGAAGCAACA AGACGATCAG CACGCAAAAG CGTAGCGCGT ACCGCAAGCT CGGCATTTCC
GGCGATCGCG AGCTGTTCAA GCTCGAGCGA GAACTGCTCG ACAGCTCGGG CGAAGCGGGC
GGCCCGTACG CGAACTGA
 
Protein sequence
MCHTSRQSQG RATPSHSMPH EKLPTPRARE QLSVIMLDDH EVVLSGITYQ LKRERDIAVL 
GTFSRSRQLF DYLAQHGPAL AHTRPVLLID YALGPQDTDG IALIRRLCVQ FPVCPILVVS
GHLQPSIVRL ALMAGARGYI GKDCTLEELV DAIRRVASGE KYVHPSLAER DDLVPPAAIE
MRRGDTGRAT LASLLSPREL EVLRLTLQGF EVGQIAEKLS RSNKTISTQK RSAYRKLGIS
GDRELFKLER ELLDSSGEAG GPYAN