Gene BTH_II0136 details

Gene Information

• Locus tag: BTH_II0136
• ID: 3845723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: -
• Start bp: 162203
• End bp: 164083
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637837442
• Product: hypothetical protein
• Protein accession: YP_438338
• Protein GI: 83718132
• COG category: [S] Function unknown
• COG ID: [COG3519] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03359] type VI secretion protein, VC_A0110 family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.640708
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCCGC AGTTTCTCGA CCATTACAAC CGCGAATTGA CCTACATGCG GGAGTTGTCT 
GCGGAATTCG CGGCGCAGCA CCCGAAGATC GCGCGCCGGC TCGGCATGCA AGGCATCGAA 
GTGGCGGACC CCTACGTGGA ACGGCTCATC GAGGCGTTCT GCTTCATGTC CGCACGCACT 
CAACTCAAGC TCGAGGCCGA GTTTCCCCGC TTCACGCAAC GCCTGCTCGA AGTCACCTAT 
CCGAATTACG TCGCGCCGAC GCCGTCGATG GCCGTCGCGC GCCTGCGTCC AAGCCTGCGG 
GAAGGCGATT TCAGCAAGGG GTTCAAGGTT CCCCGTCACA GCATGCTGCG CTCGTCGATC 
CCGCCCGGCG AGCAGACCGC GTGCGAATTC CGCACCGGCC AGGACATCAC GCTCTGGCCC 
ATCGAGATCG CCGGCGCGAC GCTGACCGCC GTGCCGCCCG ATCTTCCCGA TCTTCAGCGC 
AGCCTGCTGC CGCACACGAA GCTGCGCGGC GCGCTCCGGC TGCGCGTGCG CACCGTCGGC 
GAAATCAAGT TCTCGCAAAT TGCCGGACTC GATCGCCTCT CGCTGTATAT CGGCGGCGAC 
GAACGCATCG CCTCCCATCT CTTCGAACTG ATTCACGCAA GCAGCGTCGC GTCGGTCGTG 
CGCGCGCAGG GCGCCGCGCG CGGCGAAGGC GTCGTCGTTG CGAAGAACGC GGTCGATTTC 
GAAGGCTTAT CGCCCGATCA AAGCTTGTTG CCGCTCGTAT GGAACACGTT CCATGGGCAC 
AATCTGCTGC ACGAATACTT CACCTGCCGC CAACGCTTCT ATTTCTTCGC GCTGACGCAA 
TTGAACGCCG GCTTGTCGCG CATCGACGGA AAGGAAGCCG AAATCGTGCT GTTGCTCGAC 
CGCTTGCCCG ACGAACTCGT CACGCACGTC GAGGCCGCGC GGTTTCTGCT GTTTTGCGCC 
CCCATCGTCA ATCTGTTCCC GAAGCGGACC GACCGAGTGG AAATCAATCG CGCCCAAACC 
GCGTTCCACC TGATACCGGA CCGCACCCGC CCGCTCGATT ACGAAGTGTT CTCGGTATCG 
CGCGTGTTCG GGCAAAAAGC CGAAACGTCG ACGGAAGTCA CCTTCAACCC GCTCTATCAG 
ACGCTGCATA GCGACATCGG AAATTACGGC CGGTATTTCT CGATTCTGCG CGAACCGAGA 
ACGACGTCGA CCAACGCGCG CAAGTATGGA ACGCGCACGC CATACGTCGG AACGGAAGTC 
TACGTGTCGC TCGTCGACCA GGCCGAAGCG CCGTACGCCG ACGACATTCG TTACCTGTCC 
GTCGACGCGT GGGTCACCAA CCGCGATCTT CCCCGACTGA TCCCGCGCAA CGGCGTCAAC 
GATCTGACGA TGCAAGACTC CGTGCCGATC GAAGGCGTGA GCCTGGTTCA TCCGCCGAGC 
GCGCCGCGCG AGCCATACGC GACAGGTGAA ACCGCGTGGC GCCTGATTCG CCAGCTCAGC 
TTCAACTACA TGCCGCTTGC CGAGCTCGAT CACCGCGACG GCGGCCAGGC GTTGCGCAAC 
ATGCTGCGCC TGTTCGTCGG CACGAGCGAA CGCGAACAGG CCACGCAGAT CGACAGCCTG 
GTCGGCGCGC GCACGGAGCC GGTCGTCCGG CGTCTGCCGG GTCACGGGCT CTTGGTTTAC 
GGACGCGGCG TTCGATGCGA ACTGACCGTC GACGAAAGCG GCTTCTCGGG GTTGAGCCCA 
TACCTGTTCG GTCTCGTGCT CGAGCAGTAC CTCACGCGCC ATGTCTCGAT CAATGTCTTC 
ACCGAGACCG AGCTTCGCTC GATGCAACGC GGCCTCGTCA CGCGATGGAA GCCGCGAATG 
GGCGGAAGGG GCGCGGTATG A 

 

Protein sequence

MDPQFLDHYN RELTYMRELS AEFAAQHPKI ARRLGMQGIE VADPYVERLI EAFCFMSART 
QLKLEAEFPR FTQRLLEVTY PNYVAPTPSM AVARLRPSLR EGDFSKGFKV PRHSMLRSSI 
PPGEQTACEF RTGQDITLWP IEIAGATLTA VPPDLPDLQR SLLPHTKLRG ALRLRVRTVG 
EIKFSQIAGL DRLSLYIGGD ERIASHLFEL IHASSVASVV RAQGAARGEG VVVAKNAVDF 
EGLSPDQSLL PLVWNTFHGH NLLHEYFTCR QRFYFFALTQ LNAGLSRIDG KEAEIVLLLD 
RLPDELVTHV EAARFLLFCA PIVNLFPKRT DRVEINRAQT AFHLIPDRTR PLDYEVFSVS 
RVFGQKAETS TEVTFNPLYQ TLHSDIGNYG RYFSILREPR TTSTNARKYG TRTPYVGTEV 
YVSLVDQAEA PYADDIRYLS VDAWVTNRDL PRLIPRNGVN DLTMQDSVPI EGVSLVHPPS 
APREPYATGE TAWRLIRQLS FNYMPLAELD HRDGGQALRN MLRLFVGTSE REQATQIDSL 
VGARTEPVVR RLPGHGLLVY GRGVRCELTV DESGFSGLSP YLFGLVLEQY LTRHVSINVF 
TETELRSMQR GLVTRWKPRM GGRGAV