| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0129 |
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| Symbol | |
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| ID | 3845819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 151273 |
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| End bp | 153891 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637837435 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_438331 |
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| Protein GI | 83718246 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.176404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACC ATTTTTCGAA CGGACGGACG AATCAAAGCC GTACGGTAGT GATCCGCAGC
GGTGCGATGC CGCGGCTGCT TGGTCAGCCT GCGCTCAAGT TCCTGTCGCT GCGCGGTGAA
GAGCACCTCG GAAAACTCTA TACGTACGAA CTGCTCCTGC GCACGCCGGA CGATTTCCAT
GTTCCGTTGG CGACGAGCGC GAATCTCGAC CTGAAGGCGA TGATCGGCAC GGAGATGACT
GTCGGCATTC AGCTCGACGG AATCGGAACG GGCGCGCAAG GGGGCGTTGG CGCGGGCGCG
CGCGAAATCA GCGGGCTCGT GGTCAAGGCG GGCTTTCTTC GCAGCGAAGG GCGCTACAAC
GTCTATCGCA TCGAGCTGCG CCCCTGGCTG TGGCTCGCGA CTTTGACGAG CGACTACAAG
ATCTTCCAGG ACAAGAGCGT CGTCGAAATC ATCGACACGG TCTTGCACGA TTACCCTTAC
CCGGTCGAGA AGCGGCTCGA CATCGACAAA TATTCGGTTG CGGGCGAGAG CGCTCGAAAC
GAGCCGCGCG CGTTCCAGGT GCAATACGGC GAAACCGATT TCGACTTCGT TCAGCGCTTG
ATGGAGGAGT GGGGGATCTA CTGGTTCTTC GAGCACTCGG ACAACAAGCA TCGCCTTGTC
TTGTGCGATC ACATCGGCGG ACATCGCAAG GCGCCGAGCG AGGCCTATCA CGAGATCGCG
CATCATCCCG AAGGCGGGAA GATCGACATC GAGTACATCA ACTATTTTTC GACGGACGAA
GCGCTGCGGC CGGGCCGCGT CGTGATAGAC GACTTCGATT TCACGCGTCC GCTCGCGAGC
CTCGTCACGT CGAATCACCA GCCGCGGGAA ACGAACTGGG GAGAAGGCGA GCTGTTCGAA
TGGCCGGGCG ACTACACCGA TAGCAAGCAC GGCGATCTCA TTAGCCGTGT GCGCATGGAG
GAGCGCCGCG CTACGGGGTC GCGCGCATAC GGTCGGGGCA ACGTGCGCGG CCTCGCATGC
GGCCATACGT TCGTGTTGGC GAAGCACAAG CACGACGACG CCAACCGCGA GTATCTCGTC
ATCGAATCGG CGTTGATGCT GACCGAAGTC GCGGACGAAA CGGGCAGCGG CTACCGCTAC
GAATGCGACA ACGAGTTGGT CGTGCAGCCG TCGAACGAGG TGTTCCGGAT GCCGCGCGAA
ACGCCGAAGC CGACGACGAA CGGGCCACAG TCCGCGATCG TGGTCGGGCC GCCGGGCCAC
GAGGTATGGA CCGACGAATT CGGCCGCGTG AAGATCCGTT TTCTGTGGGA TCGCTACGCA
CGCAATGACG CGACGGATTC CTGCTGGGTG CGCGTGAGCC AGGCGTGGGC CGGCGTGAAC
TTCGGCGGCA TCTACATTCC GCGGATCGGC CAGGAGGTGA TCGTCGGATT CATGAACGGC
GACCCTGACC GTCCGCTGAT TCTCGGCAGT CTCTACAACA CCATTACGCC GCCGCCTTGG
GATCTGCCCG GCGACGCGAC GAAGAGCGGG TTCAAGAGCA AGTCGATCAC GGGCGGGCGC
GAGAACTACA ACGGCATCCG CTTCGAGGAC AAGCTGGGGG CCGAGGAGTT TCACATGCAG
GCGGAAAAGG ACATGAACCG CCTGACGAAG AACGACGAGT CGCATACGAT CGGCGCGAAT
TATTCGATCG GCGTCGGGAT CACCCACACG CGAGCGGTGG GCGCCATGTT CAGCAGCATT
GTCGGCGGAG CCGCCAGCTA TGCGGTGGGC GGCGCGGAGT CGACGATGAT CGGCGGTGCG
TATGCGTTGA ACGTCGGCGG TGCGCACGCG GTTGCGGTGG GCGGCGCATC GTCCGTTTCC
GTTGGCGGCG CATACGCGCG CAATGTCGGC GGCGCGTATG CGCTGACAGT GGGGGGCGTG
CTGTCGATCG TCTGCGGCGC GTCTTCGATC ACCATGACGG CCTGCGGCTC GATCAAGATC
GTCGGCAAGA ATATTCGCAT CATCGGCAGC GACGAAGTCG TCGTGCAAGG CGCGCCGCTG
CAGCTGAATC CCGGCGATTC GGATTGCGGA GGCGGAGGCG GCGGTGGCGG CGGTGGCGGC
GCGATTCCGC CGATTCCGTT GCCGTCGTTC TTCCTCGATA TTACGAAGCC GATCCTTCCG
CCGCCGCCGC CGCCACCGAC GGAGGTGCCG CCGGAGCCGA CGCCGACGCC GGAGCCGACG
CCAACGCCGG AGCCAACGCC AACGCCAACG CCGACGCCGA CGCCGACGCC GACGCCAACG
CCAACGCCAA CGCCAACGCC AACGCCAACG CCAACGCCAA CGCCAACGCC AACGCCAACG
CCAACGCCAA CGCCAACGCC GACGCCGACG CCGACGCCGA CGCCAACGCC GACGCCGACG
CCGACGCCAA CGCCAACGCC AACGCCGACG CCGACGCCGA CGCCGACGCC GACGCCGACG
CCGACGCCAA CGCCAACGCC GACGCCGACG CCAACGCCGA CGCCGACGCC AACGCCGACG
CCAACGCCAA CGCCGACGCC GACGCCAACG CCAACGCCGA CGCCGACGCC GACGCCGACG
CCAACGCCAA CGCCAACTCC GACCAGTTCC GAGATTTGA
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| Protein sequence | MPNHFSNGRT NQSRTVVIRS GAMPRLLGQP ALKFLSLRGE EHLGKLYTYE LLLRTPDDFH
VPLATSANLD LKAMIGTEMT VGIQLDGIGT GAQGGVGAGA REISGLVVKA GFLRSEGRYN
VYRIELRPWL WLATLTSDYK IFQDKSVVEI IDTVLHDYPY PVEKRLDIDK YSVAGESARN
EPRAFQVQYG ETDFDFVQRL MEEWGIYWFF EHSDNKHRLV LCDHIGGHRK APSEAYHEIA
HHPEGGKIDI EYINYFSTDE ALRPGRVVID DFDFTRPLAS LVTSNHQPRE TNWGEGELFE
WPGDYTDSKH GDLISRVRME ERRATGSRAY GRGNVRGLAC GHTFVLAKHK HDDANREYLV
IESALMLTEV ADETGSGYRY ECDNELVVQP SNEVFRMPRE TPKPTTNGPQ SAIVVGPPGH
EVWTDEFGRV KIRFLWDRYA RNDATDSCWV RVSQAWAGVN FGGIYIPRIG QEVIVGFMNG
DPDRPLILGS LYNTITPPPW DLPGDATKSG FKSKSITGGR ENYNGIRFED KLGAEEFHMQ
AEKDMNRLTK NDESHTIGAN YSIGVGITHT RAVGAMFSSI VGGAASYAVG GAESTMIGGA
YALNVGGAHA VAVGGASSVS VGGAYARNVG GAYALTVGGV LSIVCGASSI TMTACGSIKI
VGKNIRIIGS DEVVVQGAPL QLNPGDSDCG GGGGGGGGGG AIPPIPLPSF FLDITKPILP
PPPPPPTEVP PEPTPTPEPT PTPEPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT
PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT
PTPTPTPTPT PTPTPTPTPT PTPTPTPTSS EI
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