Gene BTH_II0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0115 
Symbol 
ID3844752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp132907 
End bp133461 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID637837421 
Productfrimbrial protein 
Protein accessionYP_438317 
Protein GI83717319 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAGA ATGTCGTAAG TTTCGCTGCG GCGGCATTGC TTGGTCTTGG CGCAACGCAG 
GCTGCGTTTG CCCAGACGGC AGGGGCGGCT CAAGGTAAGG TGACGTTCAA TGGCGAACTC
ATCACCAGCA CGTGTACGGT CGATGCGGAC AGCAAGGACC GAATTGTCCA ACTGCCGAAG
GTCTCGACCA ACACGCTGAC TACCGCAGGC CAAACGGCTG GTTCGCGGCC GTTCGACATC
AAGGTGATTG ATTGCCCGAA GGACGTCAAG GTCGCGGCTC ACTTCGAGAT GGACAACATG
CATCCTGAAA GCCGCACGTT GAAGAACCTC GACGAGACGG ACAAAGGTGC GAAGAACGTT
TCGGTTCAAC TGGTAGAAGC TGATGGTACT CCGCTGGACG TCGGCTCCAC GAGCAAGAAC
TTTGTCGAGG TGTCAGACAA CGGTGCGGGC AAGTACGGCG CAACGTTGAC CTACGGTGGC
CAGTACTACG CCTTGGGCAA AACGGACCCC GGTCTGGTTA ACACGTTTAC CCGTTTCACG
CTCGCCTACG AGTAA
 
Protein sequence
MKKNVVSFAA AALLGLGATQ AAFAQTAGAA QGKVTFNGEL ITSTCTVDAD SKDRIVQLPK 
VSTNTLTTAG QTAGSRPFDI KVIDCPKDVK VAAHFEMDNM HPESRTLKNL DETDKGAKNV
SVQLVEADGT PLDVGSTSKN FVEVSDNGAG KYGATLTYGG QYYALGKTDP GLVNTFTRFT
LAYE