Gene BTH_II0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0064 
Symbol 
ID3844592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp63133 
End bp64701 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content66% 
IMG OID637837370 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_438266 
Protein GI83717102 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCG CCGGCAAGGG CCAGCTTTTG TTCTTCGTGT CCGGCGCGCT CGCGGTCGCG 
CTCGCGCTCG GCTATGCGTT TTGGCCGGCA CCGATAGTTG TCGATACTGC GAAGGTGACG
ACGGGCCCGC TGCGGGTCAC GATCGACGAG GATGGCGAGA TTCGTGCGCA TGATCGCTAC
GTGGTCACGG CGCCGATCAC GGGCCGCTTG CTGCGCGTGA TGCTGCGTGA AGGAGACCGG
GTGCGAGCCG GAGAGGTGAT CGCGGTGCTC GTGCCCGTGC CGATGACGCC CGGTGAAAAC
GCGCAACAGC GTGCACGCGT GGAGGCCGCG GAGGCGTCGC TGCGCGAGGC GCAGGCGCGT
GTCGCGCATA CCCGCGCCGA TCTCGCGCAG GCGCGCCGGG AACGTGAGCG AGGCCAGACA
CTGGTCGATG CAGGCGCCAT CTCCAGGCAA AGCATGGAGC AGTTGCGCGC CATCGAGGCG
ACGGGCAGAA ACGATCTCGA TGCGGCGTCG GCACGCGAGA AGTCCGCAGC CGCCGAAGTT
CGGGCTGCCA CGGCGAATCT CGAGGCACTC GAGGCAGGGC TGCCCGTCAA GGTTCGTTCC
CCGGTCGACG CGGTGCTGCT GCGTGTGGAC GAAAAGAGCG AGCGTGTCGT ACCCGCGGGC
ACCGCGATCA TGCTGCTGGC CGATCCTTCG CGTTACGAAG TCGTCATCGA CGTCCTATCG
ACCGACGCGG TCAAGATCAG CCCGGGCATG CGCGTCTCCG TGGAGGATTG GGGCGGCACC
GCGCCCATCG ACGCAAGGGT GCGTGTCGTC GAGCCGGGCG CGTTCACGAA GATATCGGCG
CTCGGCGTGG AAGAACAGCG CGTGCATGTG GTTGCCGACC TGAGCGCGCC GCCCGGACGT
CTGAGCGACG GTTATCGCGT GCAGGGCAGA ATCGTCATAT GGGAGCGAAT GGATGTGCTG
AGCGTGCCGG TAGGCGCGCT GTTCCGGTGT GCGGAGCAAT GGTGCGTGTT CGAGGTCGAT
CACGGGCGGG CGATCCGGCT GTCGTTCAGA TCGGACAGCG CAATGCCGAG GCGGCTCAAG
TGCTGGATGG CCTGCAGAAC GGAAAAACCG TTGTCGTGTA CCCGCCGACC ACGCTTGCGG
AAAACACGCC GGTTCGGTTG CGCCAGACGG AGTAGCCCGT TCGGTCTTCG CGGCGTTGCG
AACATGCGCG TGCGAACCGG CTGGCGCATC GGAACGAAAT GCCCGGTTCG CCTGACGGCT
GCCGGCGGTT CTCTCGCAAG GGCGAGAGGC ACGAGTCCGC TGCGCTGCCG AATGGCACAC
GAAGGCGCAC GAGGGCGCAT TCGCGCTACG GGCAGCAGCA CGGAAGCGAA CGCGAGGTAC
CGCTTCGACG AGTCAGAACT GCTGGTCGTA GTTGAGACGG ACGTGCTCCG GATGTGCGAT
GCCGTCTCTC GTAATCATGA GATCAATGTG ATAGACGCCT TTCCAACGCG CGTCGAACAC
ATTTCCGTAC GTGACCGCAT TGCCGTCCCG CGCCGGGGCG AGTTGTATCC GTGTCGACGT
CGCGTGTAA
 
Protein sequence
MTRAGKGQLL FFVSGALAVA LALGYAFWPA PIVVDTAKVT TGPLRVTIDE DGEIRAHDRY 
VVTAPITGRL LRVMLREGDR VRAGEVIAVL VPVPMTPGEN AQQRARVEAA EASLREAQAR
VAHTRADLAQ ARRERERGQT LVDAGAISRQ SMEQLRAIEA TGRNDLDAAS AREKSAAAEV
RAATANLEAL EAGLPVKVRS PVDAVLLRVD EKSERVVPAG TAIMLLADPS RYEVVIDVLS
TDAVKISPGM RVSVEDWGGT APIDARVRVV EPGAFTKISA LGVEEQRVHV VADLSAPPGR
LSDGYRVQGR IVIWERMDVL SVPVGALFRC AEQWCVFEVD HGRAIRLSFR SDSAMPRRLK
CWMACRTEKP LSCTRRPRLR KTRRFGCARR SSPFGLRGVA NMRVRTGWRI GTKCPVRLTA
AGGSLARARG TSPLRCRMAH EGARGRIRAT GSSTEANARY RFDESELLVV VETDVLRMCD
AVSRNHEINV IDAFPTRVEH ISVRDRIAVP RRGELYPCRR RV