Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0064 |
Symbol | |
ID | 3844592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 63133 |
End bp | 64701 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637837370 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_438266 |
Protein GI | 83717102 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGCG CCGGCAAGGG CCAGCTTTTG TTCTTCGTGT CCGGCGCGCT CGCGGTCGCG CTCGCGCTCG GCTATGCGTT TTGGCCGGCA CCGATAGTTG TCGATACTGC GAAGGTGACG ACGGGCCCGC TGCGGGTCAC GATCGACGAG GATGGCGAGA TTCGTGCGCA TGATCGCTAC GTGGTCACGG CGCCGATCAC GGGCCGCTTG CTGCGCGTGA TGCTGCGTGA AGGAGACCGG GTGCGAGCCG GAGAGGTGAT CGCGGTGCTC GTGCCCGTGC CGATGACGCC CGGTGAAAAC GCGCAACAGC GTGCACGCGT GGAGGCCGCG GAGGCGTCGC TGCGCGAGGC GCAGGCGCGT GTCGCGCATA CCCGCGCCGA TCTCGCGCAG GCGCGCCGGG AACGTGAGCG AGGCCAGACA CTGGTCGATG CAGGCGCCAT CTCCAGGCAA AGCATGGAGC AGTTGCGCGC CATCGAGGCG ACGGGCAGAA ACGATCTCGA TGCGGCGTCG GCACGCGAGA AGTCCGCAGC CGCCGAAGTT CGGGCTGCCA CGGCGAATCT CGAGGCACTC GAGGCAGGGC TGCCCGTCAA GGTTCGTTCC CCGGTCGACG CGGTGCTGCT GCGTGTGGAC GAAAAGAGCG AGCGTGTCGT ACCCGCGGGC ACCGCGATCA TGCTGCTGGC CGATCCTTCG CGTTACGAAG TCGTCATCGA CGTCCTATCG ACCGACGCGG TCAAGATCAG CCCGGGCATG CGCGTCTCCG TGGAGGATTG GGGCGGCACC GCGCCCATCG ACGCAAGGGT GCGTGTCGTC GAGCCGGGCG CGTTCACGAA GATATCGGCG CTCGGCGTGG AAGAACAGCG CGTGCATGTG GTTGCCGACC TGAGCGCGCC GCCCGGACGT CTGAGCGACG GTTATCGCGT GCAGGGCAGA ATCGTCATAT GGGAGCGAAT GGATGTGCTG AGCGTGCCGG TAGGCGCGCT GTTCCGGTGT GCGGAGCAAT GGTGCGTGTT CGAGGTCGAT CACGGGCGGG CGATCCGGCT GTCGTTCAGA TCGGACAGCG CAATGCCGAG GCGGCTCAAG TGCTGGATGG CCTGCAGAAC GGAAAAACCG TTGTCGTGTA CCCGCCGACC ACGCTTGCGG AAAACACGCC GGTTCGGTTG CGCCAGACGG AGTAGCCCGT TCGGTCTTCG CGGCGTTGCG AACATGCGCG TGCGAACCGG CTGGCGCATC GGAACGAAAT GCCCGGTTCG CCTGACGGCT GCCGGCGGTT CTCTCGCAAG GGCGAGAGGC ACGAGTCCGC TGCGCTGCCG AATGGCACAC GAAGGCGCAC GAGGGCGCAT TCGCGCTACG GGCAGCAGCA CGGAAGCGAA CGCGAGGTAC CGCTTCGACG AGTCAGAACT GCTGGTCGTA GTTGAGACGG ACGTGCTCCG GATGTGCGAT GCCGTCTCTC GTAATCATGA GATCAATGTG ATAGACGCCT TTCCAACGCG CGTCGAACAC ATTTCCGTAC GTGACCGCAT TGCCGTCCCG CGCCGGGGCG AGTTGTATCC GTGTCGACGT CGCGTGTAA
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Protein sequence | MTRAGKGQLL FFVSGALAVA LALGYAFWPA PIVVDTAKVT TGPLRVTIDE DGEIRAHDRY VVTAPITGRL LRVMLREGDR VRAGEVIAVL VPVPMTPGEN AQQRARVEAA EASLREAQAR VAHTRADLAQ ARRERERGQT LVDAGAISRQ SMEQLRAIEA TGRNDLDAAS AREKSAAAEV RAATANLEAL EAGLPVKVRS PVDAVLLRVD EKSERVVPAG TAIMLLADPS RYEVVIDVLS TDAVKISPGM RVSVEDWGGT APIDARVRVV EPGAFTKISA LGVEEQRVHV VADLSAPPGR LSDGYRVQGR IVIWERMDVL SVPVGALFRC AEQWCVFEVD HGRAIRLSFR SDSAMPRRLK CWMACRTEKP LSCTRRPRLR KTRRFGCARR SSPFGLRGVA NMRVRTGWRI GTKCPVRLTA AGGSLARARG TSPLRCRMAH EGARGRIRAT GSSTEANARY RFDESELLVV VETDVLRMCD AVSRNHEINV IDAFPTRVEH ISVRDRIAVP RRGELYPCRR RV
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